RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RUSC1-AS1Q66K80 236 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 HSD17B13Q7Z5P4 300 aaPredicted RBP12.14□□□□□ -0.47
HDHD3-201ENST00000238379 EIF4E3Q8N5X7 224 aaKnown RBP12.14□□□□□ -0.47
HDHD3-201ENST00000238379 LINC01356Q8N9X3 169 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 HRH4Q9H3N8 390 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 KIAA1456Q9P272 454 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 TIMM9Q9Y5J7 89 aa12.14□□□□□ -0.47
HDHD3-201ENST00000238379 VPS13CQ709C8 3753 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 IGHV3OR16-10A0A075B7F0 116 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 ANKRD34BA5PLL1 514 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 RNF223E7ERA6 249 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 BRS3P32247 399 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 CAMLGP49069 296 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 GNB1P62873 340 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 SERF2P84101 59 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 C5orf64Q2M2E5 130 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 ARSJQ5FYB0 599 aaPredicted RBP12.13□□□□□ -0.47
HDHD3-201ENST00000238379 FAM120AOSQ5T036 256 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 KRTAP1-3Q8IUG1 177 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 MARC2Q969Z3 335 aa12.13□□□□□ -0.47
HDHD3-201ENST00000238379 FAM106CPP0CH98 169 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 IGHV4-38-2P0DP08 117 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 PRSS57Q6UWY2 283 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 TREML4Q6UXN2 200 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 SRSF12Q8WXF0 261 aaKnown RBP12.12□□□□□ -0.47
HDHD3-201ENST00000238379 P2RX4Q99571 388 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 NPCDR1Q9BY65 106 aa12.12□□□□□ -0.47
HDHD3-201ENST00000238379 TEX22C9J3V5 150 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 FNDC10F2Z333 226 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 AVPP01185 164 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 AREGP15514 252 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 TMEM11P17152 192 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 ZNF616Q08AN1 781 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 BRD3OSQ6XYD6 125 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 MAPK1IP1LQ8NDC0 245 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 NPVFQ9HCQ7 196 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 SMCO3A2RU48 225 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 MRPL41Q8IXM3 137 aaKnown RBP12.11□□□□□ -0.47
HDHD3-201ENST00000238379 VSIRQ9H7M9 311 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 RPRMQ9NS64 109 aa12.11□□□□□ -0.47
HDHD3-201ENST00000238379 LSM4Q9Y4Z0 139 aaKnown RBP12.11□□□□□ -0.47
HDHD3-201ENST00000238379 RAB19A4D1S5 217 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 NCBP2LA6PVI3 153 aaKnown RBP12.1□□□□□ -0.47
HDHD3-201ENST00000238379 NUDT19A8MXV4 375 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 MPDU1O75352 247 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 REG1AP05451 166 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 SUB1P53999 127 aaKnown RBP eCLIP12.1□□□□□ -0.47
HDHD3-201ENST00000238379 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
HDHD3-201ENST00000238379 PVRIGQ6DKI7 326 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 IL34Q6ZMJ4 242 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 ZNF114Q8NC26 417 aa12.1□□□□□ -0.47
HDHD3-201ENST00000238379 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
HDHD3-201ENST00000238379 A0A0U1RQK1 487 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 CNIH1O95406 144 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 APELAP0DMC3 54 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 CD69Q07108 199 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 MLANAQ16655 118 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 ACSM6Q6P461 480 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 CACNG8Q8WXS5 425 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 Q96MF0 132 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
HDHD3-201ENST00000238379 MEGF9Q9H1U4 602 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 I3L521 148 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 TGFAP01135 160 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 MFAP2P55001 183 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 ELLP55199 621 aaPredicted RBP12.09□□□□□ -0.47
HDHD3-201ENST00000238379 FXYD3Q14802 87 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 ZNF562Q6V9R5 426 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 MGST2Q99735 147 aa12.09□□□□□ -0.47
HDHD3-201ENST00000238379 UNC79Q9P2D8 2635 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 ZANQ9Y493 2812 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 CREBBPQ92793 2442 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 C17orf112F2Z3M2 114 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 J3QLI3 93 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 TSPAN15O95858 294 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 GPX4P36969 197 aaPredicted RBP12.08□□□□□ -0.48
HDHD3-201ENST00000238379 CX3CL1P78423 397 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 GAMTQ14353 236 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 TMEM249Q2WGJ8 235 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 TOR2AQ5JU69 321 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 SPSB3Q6PJ21 355 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 TEPPQ6URK8 271 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 Q8N9W7 124 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 PIFOQ8TCI5 191 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 SSMEM1Q8WWF3 244 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 FNDC4Q9H6D8 234 aaPredicted RBP12.08□□□□□ -0.48
HDHD3-201ENST00000238379 C1RLQ9NZP8 487 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 ABCA1O95477 2261 aa12.08□□□□□ -0.48
HDHD3-201ENST00000238379 CR1P17927 2039 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 AGPAT2O15120 278 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
HDHD3-201ENST00000238379 RAB2AP61019 212 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms