RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 HOXB4P17483 251 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-218ENST00000600383 FGF7P21781 194 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 CD1BP29016 333 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 SNCAP37840 140 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 OR1L8Q8NGR8 309 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 OR4A5Q8NH83 315 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 USP9YO00507 2555 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-218ENST00000600383 RAB19A4D1S5 217 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 ACTL6BO94805 426 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 DVL1P1P54792 670 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-218ENST00000600383 ELLP55199 621 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-218ENST00000600383 BPIFCQ8NFQ6 507 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 VSIRQ9H7M9 311 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 NDUFA4L2Q9NRX3 87 aa12.2□□□□□ -0.46
HIF3A-218ENST00000600383 METTL1Q9UBP6 276 aaKnown RBP12.2□□□□□ -0.46
HIF3A-218ENST00000600383 NDUFS8O00217 210 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 GNB1P62873 340 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 HES1Q14469 280 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 PSG5Q15238 335 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 ZNF787Q6DD87 383 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 IL34Q6ZMJ4 242 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 UNKLQ9H9P5 680 aaKnown RBP12.19□□□□□ -0.46
HIF3A-218ENST00000600383 FAM96BQ9Y3D0 163 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 IGKV1D-33P01593 117 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 IGKV1-33P01594 117 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
HIF3A-218ENST00000600383 PLGLAQ15195 96 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 TNXAQ16473 311 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 SFT2D1Q8WV19 159 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 TBX15Q96SF7 602 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 TREM1Q9NP99 234 aa12.19□□□□□ -0.46
HIF3A-218ENST00000600383 VENTXO95231 258 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 H2AFB1P0C5Y9 115 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 APELAP0DMC3 54 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 DYNAPQ8N1N2 210 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 ZNF709Q8N972 641 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 TEX45Q8NA69 505 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 PSMG3Q9BT73 122 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-218ENST00000600383 RPRMQ9NS64 109 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 SIGLEC9Q9Y336 463 aa12.18□□□□□ -0.46
HIF3A-218ENST00000600383 NUDT19A8MXV4 375 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 OR13C7P0DN81 318 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 SERF2P84101 59 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 MMDQ15546 238 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 VWC2Q2TAL6 325 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 PPP1R27Q86WC6 154 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 NPCDR1Q9BY65 106 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-218ENST00000600383 KMT2BQ9UMN6 2715 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-218ENST00000600383 PTPN13Q12923 2485 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 VWC2LB2RUY7 222 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 KRBOX1C9JBD0 128 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 PRSS46E5RG02 174 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 PRSS8Q16651 343 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 MMD2Q8IY49 270 aa12.17□□□□□ -0.46
HIF3A-218ENST00000600383 FBN2P35556 2912 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CGB1A6NKQ9 187 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 EIF3GO75821 320 aaKnown RBP eCLIP12.16□□□□□ -0.46
HIF3A-218ENST00000600383 SCAF4O95104 1147 aaKnown RBP12.16□□□□□ -0.46
HIF3A-218ENST00000600383 REG1AP05451 166 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 ZP3P21754 424 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 KRTAP10-9P60411 292 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 WT1-ASQ06250 92 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 UQCC3Q6UW78 93 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 TREML4Q6UXN2 200 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CFHR4Q92496 578 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 EIF5A2Q9GZV4 153 aaKnown RBP12.16□□□□□ -0.46
HIF3A-218ENST00000600383 ANKRD17O75179 2603 aaKnown RBP12.16□□□□□ -0.46
HIF3A-218ENST00000600383 A0A1B0GW64 132 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 A0A1W2PN81 502 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 FCN1O00602 326 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CRYGBP07316 175 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CHRNA7P36544 502 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 UBE2E1P51965 193 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CCL20P78556 96 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 MLANAQ16655 118 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 ARSJQ5FYB0 599 aaPredicted RBP12.16□□□□□ -0.46
HIF3A-218ENST00000600383 GGACTQ9BVM4 153 aa12.16□□□□□ -0.46
HIF3A-218ENST00000600383 CSMD1Q96PZ7 3565 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 ABCA12Q86UK0 2595 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 MOSP00540 346 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 APOC3P02656 99 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 SNRNP70P08621 437 aaKnown RBP12.15□□□□□ -0.46
HIF3A-218ENST00000600383 RNASE2P10153 161 aaKnown RBP12.15□□□□□ -0.46
HIF3A-218ENST00000600383 RAB2AP61019 212 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 DLK1P80370 383 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 CCDC144NLQ6NUI1 221 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 ACSM6Q6P461 480 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 NPVFQ9HCQ7 196 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 WDR83OSQ9Y284 106 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 TIMM9Q9Y5J7 89 aa12.15□□□□□ -0.46
HIF3A-218ENST00000600383 ABCA2Q9BZC7 2435 aa12.15□□□□□ -0.47
HIF3A-218ENST00000600383 IGHV3OR16-10A0A075B7F0 116 aa12.14□□□□□ -0.47
HIF3A-218ENST00000600383 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms