RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 SCO1O75880 301 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 CDS2O95674 445 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 SSBP2P81877 361 aaPredicted RBP11.79□□□□□ -0.52
DDX49-204ENST00000595858 NDPQ00604 133 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 TMEM187Q14656 261 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 FXYD3Q14802 87 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 ACOT7LQ6ZUV0 252 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 FOXRED2Q8IWF2 684 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 MMD2Q8IY49 270 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 OR4A5Q8NH83 315 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 OR1S1Q8NH92 325 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 ST8SIA2Q92186 375 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 NOL4LQ96MY1 436 aaPredicted RBP11.79□□□□□ -0.52
DDX49-204ENST00000595858 PDCD10Q9BUL8 212 aa11.79□□□□□ -0.52
DDX49-204ENST00000595858 C9orf170A2RU37 121 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 HAX1O00165 279 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 CNIH1O95406 144 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 IGF1P05019 195 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 GNB1P62873 340 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 PPP1R1AQ13522 171 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 TRAV3A0A0B4J244 114 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 UPK2O00526 184 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 ATP6V0E1O15342 81 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 BCL2L11O43521 198 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 DUS4LO95620 317 aaKnown RBP11.78□□□□□ -0.52
DDX49-204ENST00000595858 EGR2P11161 476 aaPredicted RBP11.78□□□□□ -0.52
DDX49-204ENST00000595858 VAMP1P23763 118 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 TNXAQ16473 311 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 STPG2Q8N412 459 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 KLHDC1Q8N7A1 406 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 LHFPL5Q8TAF8 219 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 TMEM56Q96MV1 263 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 LINC00052Q96N35 136 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 PARP11Q9NR21 331 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 PRR13Q9NZ81 148 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 FBXO7Q9Y3I1 522 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 TMEM56-RWDD3S4R434 201 aa11.78□□□□□ -0.52
DDX49-204ENST00000595858 ACTL6BO94805 426 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 SFT2D2O95562 160 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 IGKV1-5P01602 117 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 RLN2P04090 185 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 RPL8P62917 257 aaKnown RBP11.77□□□□□ -0.53
DDX49-204ENST00000595858 CYCSP99999 105 aaKnown RBP11.77□□□□□ -0.53
DDX49-204ENST00000595858 C12orf54Q6X4T0 127 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 H2BFWTQ7Z2G1 175 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 CENPVQ7Z7K6 275 aaPredicted RBP11.77□□□□□ -0.53
DDX49-204ENST00000595858 ZNF695Q8IW36 515 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 SELENOHQ8IZQ5 122 aaKnown RBP11.77□□□□□ -0.53
DDX49-204ENST00000595858 ARPC1AQ92747 370 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 FAM103A1Q9BTL3 118 aaKnown RBP11.77□□□□□ -0.53
DDX49-204ENST00000595858 ZNF580Q9UK33 172 aa11.77□□□□□ -0.53
DDX49-204ENST00000595858 ATG12O94817 140 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 SGMS2Q8NHU3 365 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 THAP6Q8TBB0 222 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 WIPF2Q8TF74 440 aaPredicted RBP11.76□□□□□ -0.53
DDX49-204ENST00000595858 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 DBX1A6NMT0 343 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 G3V318 75 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 OR9G9P0C7N8 305 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 MAS1LP35410 378 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 AKR1C2P52895 323 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 CRIP2P52943 208 aaPredicted RBP11.76□□□□□ -0.53
DDX49-204ENST00000595858 SMUG1Q53HV7 270 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 LGI3Q8N145 548 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 INO80EQ8NBZ0 244 aaPredicted RBP11.76□□□□□ -0.53
DDX49-204ENST00000595858 CASTOR1Q8WTX7 329 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 WFDC12Q8WWY7 111 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 IL22RA2Q969J5 263 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
DDX49-204ENST00000595858 A0A0B4J2A0 478 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 MSGN1A6NI15 193 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 P0C879 139 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 KRTAP10-3P60369 221 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 SRPXP78539 464 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 IZUMO4Q1ZYL8 232 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 C10orf55Q5SWW7 151 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 C10orf99Q6UWK7 81 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 ZNF329Q86UD4 541 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 SRSF12Q8WXF0 261 aaKnown RBP11.75□□□□□ -0.53
DDX49-204ENST00000595858 RRNAD1Q96FB5 475 aaKnown RBP11.75□□□□□ -0.53
DDX49-204ENST00000595858 NMES1Q9C002 83 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 SHPKQ9UHJ6 478 aa11.75□□□□□ -0.53
DDX49-204ENST00000595858 TRAV41A0A0B4J266 112 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 A0A0G2JRQ6 117 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 E7EUB6 86 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 MYOD1P15172 320 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 VDAC1P21796 283 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 TMEM267Q0VDI3 215 aaPredicted RBP11.74□□□□□ -0.53
DDX49-204ENST00000595858 AKIRIN2Q53H80 203 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 C3orf56Q8N813 242 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 LFNGQ8NES3 379 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 OR5AU1Q8NGC0 362 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 RNF222A6NCQ9 220 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 OPN1MWP04001 364 aa11.74□□□□□ -0.53
DDX49-204ENST00000595858 OPN1MW2P0DN77 364 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms