RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 IZUMO2Q6UXV1 221 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 PARP16Q8N5Y8 322 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 BPIFB6Q8NFQ5 453 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 OR13C3Q8NGS6 347 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 OR2G2Q8NGZ5 317 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 RHOXF1Q8NHV9 184 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 VN1R17PQ8TDU5 208 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 IL1F10Q8WWZ1 152 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 MYCBPQ99417 103 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 UQCC2Q9BRT2 126 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 VSIRQ9H7M9 311 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 ISG20L2Q9H9L3 353 aaKnown RBP4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 PAK1IP1Q9NWT1 392 aaPredicted RBP4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 THYN1Q9P016 225 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 ABRACLQ9P1F3 81 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 RAB26Q9ULW5 256 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 PEX16Q9Y5Y5 336 aa4.45□□□□□ -1.7
HERPUD1-217ENST00000569429 TRAV14DV4A0A0A6YYC5 116 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 LOC102723971A0A1B0GUV8 181 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 A0A1W2PP11 408 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 A0A1W2PQL4 384 aaPredicted RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 J3QLW9 94 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 K7EQG2 157 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 SIVA1O15304 175 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 NUPL2O15504 423 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 ATP5G1P05496 136 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 OR2T7P0C7T2 308 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 DEFA4P12838 97 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF19P17023 458 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 RPL27AP46776 148 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 ATP5G3P48201 142 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 SNRPGP62308 76 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 TMED1Q13445 227 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 TPBGQ13641 420 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 SMN1Q16637 294 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 FAM220AQ7Z4H9 259 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 LHFPL3Q86UP9 236 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 OR51A2Q8NGJ7 313 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 MRPL48Q96GC5 212 aaKnown RBP4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 CNBD2Q96M20 576 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 RAB40CQ96S21 281 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 CCDC90BQ9GZT6 254 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 SCN3BQ9NY72 215 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 RABAC1Q9UI14 185 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 GNG8Q9UK08 70 aa4.44□□□□□ -1.7
HERPUD1-217ENST00000569429 IGHV3OR16-12A0A075B7B8 117 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 IGHV3OR16-13A0A075B7E8 117 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 IGHV3-74A0A0B4J1X5 117 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 IRGMA1A4Y4 181 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 UBE2QL1A1L167 161 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 LRCOL1A6NCL2 159 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 LYRM9A8MSI8 78 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 NPIPB6E9PJ23 425 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 ST8SIA3O43173 380 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 DENRO43583 198 aaKnown RBP4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 IGLV2-8P01709 118 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 HBE1P02100 147 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 GNAO1P09471 354 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF688P0C7X2 276 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 SAA1P0DJI8 122 aaPredicted RBP4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 MYL12AP19105 171 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 RAB3AP20336 220 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 CEACAM6P40199 344 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 CCR9P51686 369 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 ODF1Q14990 250 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 TP53I3Q53FA7 332 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 OR10K2Q6IF99 312 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 FDX2Q6P4F2 183 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 ACBD7Q8N6N7 88 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 CLRN3Q8NCR9 226 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 RXFP4Q8TDU9 374 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 GGHQ92820 318 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 LGALS12Q96DT0 336 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 TMEM80Q96HE8 168 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 NEDD4LQ96PU5 975 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 NDUFA13Q9P0J0 144 aa4.43□□□□□ -1.7
HERPUD1-217ENST00000569429 EFCAB10A6NFE3 127 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 DBX1A6NMT0 343 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 H3BMM0 161 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 TNFAIP8O95379 198 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 CRYZL1O95825 349 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 EIF4EP06730 217 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 HTR1AP08908 422 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 RAB6AP20340 208 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 ZBTB25P24278 435 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 HOXA1P49639 335 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 PSMD7P51665 324 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 GBX2P52951 348 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 NANOS3P60323 173 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 RPL37AP61513 92 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 RPL11P62913 178 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF85Q03923 595 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 RELQ04864 619 aaPredicted RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 ST3GAL4Q11206 333 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 GPR176Q14439 515 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 RRN3P1Q2M238 152 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 SIGIRRQ6IA17 410 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms