RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 C2orf68Q2NKX9 166 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 AARDQ4LEZ3 155 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 AKIRIN2Q53H80 203 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 C10orf55Q5SWW7 151 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 Q6ZS46 218 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 LURAP1LQ8IV03 231 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 Q8N2B8 174 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 OR4D5Q8NGN0 318 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 OR4F5Q8NH21 305 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 SRSF8Q9BRL6 282 aaKnown RBP7.68□□□□□ -1.18
TMEM260-213ENST00000556929 FAM103A1Q9BTL3 118 aaKnown RBP7.68□□□□□ -1.18
TMEM260-213ENST00000556929 NMES1Q9C002 83 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 C16orf95Q9H693 158 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 PLEKHA3Q9HB20 300 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 NDUFA4L2Q9NRX3 87 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 HSPB7Q9UBY9 170 aa7.68□□□□□ -1.18
TMEM260-213ENST00000556929 TRAV41A0A0B4J266 112 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 A0A1B0GUS0 222 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 HMX3A6NHT5 357 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 LINC01548A6NM66 108 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 NXPH3O95157 252 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 LY86O95711 162 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 SCGB1D2O95969 90 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 HKR1P10072 659 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 HOXA1P49639 335 aaPredicted RBP7.67□□□□□ -1.18
TMEM260-213ENST00000556929 CRIP2P52943 208 aaPredicted RBP7.67□□□□□ -1.18
TMEM260-213ENST00000556929 SLC35B1P78383 322 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 NDPQ00604 133 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 TNFRSF9Q07011 255 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 ECSCRQ19T08 205 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 PDLIM3Q53GG5 364 aaPredicted RBP7.67□□□□□ -1.18
TMEM260-213ENST00000556929 UNQ5815/PRO19632Q6UWF5 114 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 STPG2Q8N412 459 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 LFNGQ8NES3 379 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 ASB13Q8WXK3 278 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 HIPK2Q9H2X6 1198 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 ZNF580Q9UK33 172 aa7.67□□□□□ -1.18
TMEM260-213ENST00000556929 hCG_2014768A0A024R1R8 64 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 TEX22C9J3V5 150 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 E7EUB6 86 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 INS-IGF2F8WCM5 200 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 SYNGR2O43760 224 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 RLN2P04090 185 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 CXCL3P19876 107 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 SRSF2Q01130 221 aaKnown RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 ID3Q02535 119 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 FOXL1Q12952 345 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 CXorf66Q5JRM2 361 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 CENPVQ7Z7K6 275 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 OR11H7Q8NGC8 314 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 CIB3Q96Q77 187 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 ZNF436Q9C0F3 470 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 RBKSQ9H477 322 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-213ENST00000556929 LINC00527Q9UJ94 153 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 FBXO7Q9Y3I1 522 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 WSB1Q9Y6I7 421 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
TMEM260-213ENST00000556929 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 PSMB11A5LHX3 300 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 CYB5BO43169 146 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 GIPP09681 153 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 APELAP0DMC3 54 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 OR13C7P0DN81 318 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 EGR2P11161 476 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 PVALBP20472 110 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 PSMB6P28072 239 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 SNCAP37840 140 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 SUB1P53999 127 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 H2BFSP57053 126 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 POLR2GP62487 172 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 RPP30P78346 268 aaKnown RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 SRSF4Q08170 494 aaKnown RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 TMEM95Q3KNT9 176 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 SPINK9Q5DT21 86 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 PRIMA1Q86XR5 153 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 OR10W1Q8NGF6 305 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 OR1L6Q8NGR2 347 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 FAM110DQ8TAY7 271 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 NOL4LQ96MY1 436 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 MAGT1Q9H0U3 335 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 SERTAD4Q9NUC0 356 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 LSM5Q9Y4Y9 91 aaKnown RBP7.65□□□□□ -1.18
TMEM260-213ENST00000556929 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
TMEM260-213ENST00000556929 TNCP24821 2201 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 A0A1B0GW64 132 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 IGLC7A0M8Q6 106 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 NPIPB5A8MRT5 1133 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 G3V318 75 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 H3BUA1 57 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 K7EPK0 472 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 L7N2F9 121 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 MBPP02686 304 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-213ENST00000556929 CRYGCP07315 174 aa7.64□□□□□ -1.19
TMEM260-213ENST00000556929 PET100P0DJ07 73 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms