RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 POLR2GP62487 172 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 RPL23AP62750 156 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 ERHP84090 104 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 C11orf87Q6NUJ2 197 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 PRSS54Q6PEW0 395 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 ABHD5Q8WTS1 349 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 PRSS22Q9GZN4 317 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 MAGT1Q9H0U3 335 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 WSB1Q9Y6I7 421 aa12.55□□□□□ -0.4
TRAFD1-203ENST00000547063 TCF21O43680 179 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 IGHG2P01859 326 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 OPN1MWP04001 364 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 RNASE1P07998 156 aaKnown RBP12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 TMEM267Q0VDI3 215 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 C9orf152Q5JTZ5 239 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 SLC35E3Q7Z769 313 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 NOXA1Q86UR1 476 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 GRPEL2Q8TAA5 225 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 WDR89Q96FK6 387 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 SMIM8Q96KF7 97 aa12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 TET2Q6N021 2002 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 NSD1Q96L73 2696 aaPredicted RBP12.54□□□□□ -0.4
TRAFD1-203ENST00000547063 MSGN1A6NI15 193 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 TSC22D2O75157 780 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 SCAF4O95104 1147 aaKnown RBP12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 C1QBP02746 253 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 CRYBA1P05813 215 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 SLC25A4P12235 298 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 SNCAP37840 140 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 SUB1P53999 127 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 C10orf55Q5SWW7 151 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 SGMS2Q8NHU3 365 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 PPP1R14BQ96C90 147 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 HSPB9Q9BQS6 159 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 PARP11Q9NR21 331 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 ZNF580Q9UK33 172 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 U3KQ87 197 aa12.53□□□□□ -0.4
TRAFD1-203ENST00000547063 MXRA5Q9NR99 2828 aa12.52□□□□□ -0.4
TRAFD1-203ENST00000547063 PLXNB1O43157 2135 aa12.52□□□□□ -0.4
TRAFD1-203ENST00000547063 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 AP4M1O00189 453 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 CYB5BO43169 146 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 LYL1P12980 280 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 MYOD1P15172 320 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 HTR2BP41595 481 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 VDAC2P45880 294 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 P2RY1P47900 373 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 CRIP2P52943 208 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 BLCAPP62952 87 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 SSBP2P81877 361 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 ZFP69Q49AA0 526 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 SPINK9Q5DT21 86 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 ARSJQ5FYB0 599 aaPredicted RBP12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 HYLS1Q96M11 299 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 DUX5Q96PT3 197 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 RNF126Q9BV68 326 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 ESM1Q9NQ30 184 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 PSENENQ9NZ42 101 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 MBD2Q9UBB5 411 aa12.52□□□□□ -0.41
TRAFD1-203ENST00000547063 MAST4O15021 2626 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 CGB1A6NKQ9 187 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 TEX22C9J3V5 150 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 E7EUB6 86 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 IFNA10P01566 189 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 IGF1P05019 195 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 IAPPP10997 89 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 NDPQ00604 133 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 AKIRIN2Q53H80 203 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 TMEM65Q6PI78 240 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 OR2C3Q8N628 320 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 OR1L6Q8NGR2 347 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 DCUN1D4Q92564 292 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 GON7Q9BXV9 100 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 SLC25A31Q9H0C2 315 aa12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 LYRM2Q9NU23 88 aaPredicted RBP12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 STRAPQ9Y3F4 350 aaKnown RBP12.51□□□□□ -0.41
TRAFD1-203ENST00000547063 FXYD6-FXYD2A0A087WZ82 144 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 A0A1B0GW64 132 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 IGLC7A0M8Q6 106 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 NPIPB5A8MRT5 1133 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 H0YIZ8 118 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 ATP6V0E1O15342 81 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 TSPAN9O75954 239 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 CAV2P51636 162 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 RAB11AP62491 216 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 WT1-ASQ06250 92 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 Q5BKY6 102 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 ZNF546Q86UE3 836 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 Q8N2B8 174 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 SLC24A4Q8NFF2 622 aa12.5□□□□□ -0.41
TRAFD1-203ENST00000547063 OR10W1Q8NGF6 305 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms