RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 RAB27BO00194 218 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 MFNGO00587 321 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 DFFBO76075 338 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 HRASP01112 189 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 IFNA10P01566 189 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 UCHL1P09936 223 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 CD36P16671 472 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 TIMM50Q3ZCQ8 353 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 C1orf134Q5TEV5 83 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 MFSD4AQ8N468 514 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 NANOGP1Q8N7R0 232 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 GDPD1Q8N9F7 314 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 TMEM116Q8NCL8 245 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 RAB3CQ96E17 227 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 OR10C1Q96KK4 312 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 HSD17B10Q99714 261 aaKnown RBP5.6□□□□□ -1.51
NXF1-215ENST00000533440 PLGRKTQ9HBL7 147 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 SMPD3Q9NY59 655 aaPredicted RBP5.6□□□□□ -1.51
NXF1-215ENST00000533440 OR2W1Q9Y3N9 320 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 AGRNO00468 2067 aa5.6□□□□□ -1.51
NXF1-215ENST00000533440 TRAV3A0A0B4J244 114 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 IGKV1D-13A0A0B4J2D9 117 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 MYL12BO14950 172 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 CYB5BO43169 146 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 DENRO43583 198 aaKnown RBP5.59□□□□□ -1.51
NXF1-215ENST00000533440 IFNA21P01568 189 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 IFNA17P01571 189 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 SERPINE2P07093 398 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 CTSGP08311 255 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 FGF2P09038 288 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 IGKV1-13P0DP09 117 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 RASSF2P50749 326 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 CLDN12P56749 244 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 DEFB131AP59861 70 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 PAFAH1B2P68402 229 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 PLA2G7Q13093 441 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 RAB11BQ15907 218 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 C2orf76Q3KRA6 126 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 LEMD1Q68G75 181 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 SLC25A24Q6NUK1 477 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 ZFP1Q6P2D0 407 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 MORN3Q6PF18 240 aaPredicted RBP5.59□□□□□ -1.51
NXF1-215ENST00000533440 ZNF767PQ75MW2 155 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 TRPT1Q86TN4 253 aaKnown RBP5.59□□□□□ -1.51
NXF1-215ENST00000533440 STHQ8IWL8 128 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 GBGT1Q8N5D6 347 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 CSNK1G2-AS1Q8NCQ2 148 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 ZNF555Q8NEP9 628 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 OR10W1Q8NGF6 305 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 SCARB1Q8WTV0 552 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 TCTEX1D2Q8WW35 142 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 GIMAP1Q8WWP7 306 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 FAM3DQ96BQ1 224 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 DGCR14Q96DF8 476 aaKnown RBP5.59□□□□□ -1.51
NXF1-215ENST00000533440 CMTM3Q96MX0 182 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 C21orf62Q9NYP8 219 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 SPATA2Q9UM82 520 aa5.59□□□□□ -1.51
NXF1-215ENST00000533440 IGHV3-49A0A0A0MS15 119 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 TRAV14DV4A0A0A6YYC5 116 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 IGHV3-21A0A0B4J1V1 117 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 TMEM272A0A1B0GTI8 110 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 K7EIM0 57 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 UPK2O00526 184 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 CIB2O75838 187 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 GHRHP01286 108 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 CD5P06127 495 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 SPP1P10451 314 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 HIST1H1DP16402 221 aaKnown RBP5.58□□□□□ -1.52
NXF1-215ENST00000533440 GNB3P16520 340 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 C4BPBP20851 252 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 NFYAP23511 347 aaPredicted RBP5.58□□□□□ -1.52
NXF1-215ENST00000533440 WT1-ASQ06250 92 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 POU2AF1Q16633 256 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 RNF212Q495C1 297 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 THOC7Q6I9Y2 204 aaKnown RBP5.58□□□□□ -1.52
NXF1-215ENST00000533440 ZNF66Q6ZN08 573 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 TCF24Q7RTU0 167 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 UBE2DNLQ8IWF7 75 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 FAM24BQ8N5W8 94 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 OR10R2Q8NGX6 335 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 FAM210BQ96KR6 192 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 AIFM2Q9BRQ8 373 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 QTRT1Q9BXR0 403 aaKnown RBP5.58□□□□□ -1.52
NXF1-215ENST00000533440 MS4A6AQ9H2W1 248 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 HRASLSQ9HDD0 168 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 RAB22AQ9UL26 194 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 TBC1D24Q9ULP9 559 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 AK6Q9Y3D8 172 aaKnown RBP5.58□□□□□ -1.52
NXF1-215ENST00000533440 NACAE9PAV3 2078 aa5.58□□□□□ -1.52
NXF1-215ENST00000533440 ERICH4A6NGS2 130 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 NUPL2O15504 423 aaKnown RBP5.57□□□□□ -1.52
NXF1-215ENST00000533440 RBFOX2O43251 390 aaKnown RBP eCLIP5.57□□□□□ -1.52
NXF1-215ENST00000533440 CTXN2P0C2S0 81 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 OR13C7P0DN81 318 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 DTYMKP23919 212 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 GADD45AP24522 165 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 NPY1RP25929 384 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 TAS2R31P59538 309 aa5.57□□□□□ -1.52
NXF1-215ENST00000533440 RELQ04864 619 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms