RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 OR1L8Q8NGR8 309 aa16.7■□□□□ 0.26
SQLE-206ENST00000523430 C17orf50Q8WW18 174 aa16.7■□□□□ 0.26
SQLE-206ENST00000523430 KMT2BQ9UMN6 2715 aaPredicted RBP16.7■□□□□ 0.26
SQLE-206ENST00000523430 VENTXO95231 258 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 TSPAN15O95858 294 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 CRYGBP07316 175 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 MDKP21741 143 aaPredicted RBP16.69■□□□□ 0.26
SQLE-206ENST00000523430 DVL1P1P54792 670 aaPredicted RBP16.69■□□□□ 0.26
SQLE-206ENST00000523430 ELLP55199 621 aaPredicted RBP16.69■□□□□ 0.26
SQLE-206ENST00000523430 UQCC3Q6UW78 93 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 DYNAPQ8N1N2 210 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 FAM96BQ9Y3D0 163 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 SMCO3A2RU48 225 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 CD1BP29016 333 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 FBLN7Q53RD9 439 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 TEX45Q8NA69 505 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 NARS2Q96I59 477 aaKnown RBP16.69■□□□□ 0.26
SQLE-206ENST00000523430 NPCDR1Q9BY65 106 aa16.69■□□□□ 0.26
SQLE-206ENST00000523430 SSX2Q16385 188 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 TUSC1Q2TAM9 212 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 BSXQ3C1V8 233 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 METTL1Q9UBP6 276 aaKnown RBP16.68■□□□□ 0.26
SQLE-206ENST00000523430 SIGLEC9Q9Y336 463 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 TIMM9Q9Y5J7 89 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 LRRK2Q5S007 2527 aa16.68■□□□□ 0.26
SQLE-206ENST00000523430 KRBOX1C9JBD0 128 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 CD24P25063 80 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 HABP2Q14520 560 aaPredicted RBP16.67■□□□□ 0.26
SQLE-206ENST00000523430 PRSS8Q16651 343 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 RPRMQ9NS64 109 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 WDR83OSQ9Y284 106 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 SVEP1Q4LDE5 3571 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 TNCP24821 2201 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 IGKV1D-33P01593 117 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 IGKV1-33P01594 117 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 RNASE2P10153 161 aaKnown RBP16.67■□□□□ 0.26
SQLE-206ENST00000523430 DLK1P80370 383 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 WT1-ASQ06250 92 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 ARSJQ5FYB0 599 aaPredicted RBP16.67■□□□□ 0.26
SQLE-206ENST00000523430 ACSM6Q6P461 480 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 CENPVQ7Z7K6 275 aaPredicted RBP16.67■□□□□ 0.26
SQLE-206ENST00000523430 GGACTQ9BVM4 153 aa16.67■□□□□ 0.26
SQLE-206ENST00000523430 POLR3KQ9Y2Y1 108 aaPredicted RBP16.67■□□□□ 0.26
SQLE-206ENST00000523430 ABCA2Q9BZC7 2435 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 SNCAP37840 140 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 SERF2P84101 59 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 ZNF787Q6DD87 383 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 SPSB3Q6PJ21 355 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 TREML4Q6UXN2 200 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 DPPA3Q6W0C5 159 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 FBXL15Q9H469 300 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 FAM208BQ5VWN6 2430 aa16.66■□□□□ 0.26
SQLE-206ENST00000523430 PAX1P15863 534 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 RAB2AP61019 212 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 TNXAQ16473 311 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 MINOS1Q5TGZ0 78 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 SSX7Q7RTT5 188 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 MMD2Q8IY49 270 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 MINOS1-NBL1R4GNA1 71 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 A0A1W2PN81 502 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 INS-IGF2F8WCM5 200 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 H2AFB1P0C5Y9 115 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 CHRNA7P36544 502 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 LGALS4P56470 323 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 KRTAP10-9P60411 292 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 GNB1P62873 340 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 CCL20P78556 96 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 ZNF726P1Q15940 193 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 C2orf83Q53S99 150 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 TMEM41BQ5BJD5 291 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 TREM1Q9NP99 234 aa16.65■□□□□ 0.26
SQLE-206ENST00000523430 UBE2E1P51965 193 aa16.64■□□□□ 0.25
SQLE-206ENST00000523430 MMDQ15546 238 aa16.64■□□□□ 0.25
SQLE-206ENST00000523430 PPP1R27Q86WC6 154 aa16.64■□□□□ 0.25
SQLE-206ENST00000523430 REG1AP05451 166 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 SNRNP70P08621 437 aaKnown RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 ADCYAP1P18509 176 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 SSBP2P81877 361 aaPredicted RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 ERHP84090 104 aaKnown RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 CCDC28AQ8IWP9 274 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 SFT2D1Q8WV19 159 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 C1orf159Q96HA4 380 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 RCC1LQ96I51 464 aaKnown RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 MGST2Q99735 147 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 RNF5Q99942 180 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 TMEM218A2RU14 115 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 EIF3GO75821 320 aaKnown RBP eCLIP16.63■□□□□ 0.253e-8■■■□□ 15.2
SQLE-206ENST00000523430 COMPP49747 757 aaPredicted RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 FFAR4Q5NUL3 377 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 CCDC144NLQ6NUI1 221 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 ZNF709Q8N972 641 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 AJUBAQ96IF1 538 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 EAF1Q96JC9 268 aaPredicted RBP16.63■□□□□ 0.25
SQLE-206ENST00000523430 SCRT1Q9BWW7 348 aa16.63■□□□□ 0.25
SQLE-206ENST00000523430 IGLC7A0M8Q6 106 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 C9JQL5 133 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 ACTL6BO94805 426 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 MOSP00540 346 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 APELAP0DMC3 54 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 OR13C7P0DN81 318 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms