RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	C21orf62	Q9NYP8	219 aa		7.53	□□□□□ -1.2
CLDND1-231	ENST00000515620	TBC1D24	Q9ULP9	559 aa		7.53	□□□□□ -1.2
CLDND1-231	ENST00000515620	SPATA2	Q9UM82	520 aa		7.53	□□□□□ -1.2
CLDND1-231	ENST00000515620		A0A075B6Q4	140 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	EFCAB10	A6NFE3	127 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620		F8W735	103 aa	Predicted RBP	7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	DNASE2	O00115	360 aa	Predicted RBP	7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	SLC17A2	O00624	439 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	MYL12B	O14950	172 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	NUPL2	O15504	423 aa	Known RBP	7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	CYB5B	O43169	146 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	YIF1A	O95070	293 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	IGLV2-14	P01704	120 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	WNT4	P56705	351 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	CLDN12	P56749	244 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	BRWD1-AS2	P59051	145 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	ST3GAL4	Q11206	333 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	RAB11B	Q15907	218 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620		Q56UQ5	140 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	TMEM41B	Q5BJD5	291 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	FAM90A2P	Q658T7	463 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	SLC25A24	Q6NUK1	477 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	GDPD1	Q8N9F7	314 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	RAB3C	Q96E17	227 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	ZNF414	Q96IQ9	312 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	GPHA2	Q96T91	129 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	GFI1	Q99684	422 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	HSD17B10	Q99714	261 aa	Known RBP	7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	TAS2R8	Q9NYW2	309 aa		7.52	□□□□□ -1.21
CLDND1-231	ENST00000515620	APOB	P04114	4563 aa	Known RBP	7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	IGKV1D-8	A0A087WSZ0	117 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	TRAV3	A0A0B4J244	114 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	IGKV1D-13	A0A0B4J2D9	117 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	CIB2	O75838	187 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	DFFB	O76075	338 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	OR13C7	P0DN81	318 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	IGKV1-13	P0DP09	117 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	SPP1	P10451	314 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	CD37	P11049	281 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	GNB3	P16520	340 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	NFYA	P23511	347 aa	Predicted RBP	7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	NPY1R	P25929	384 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	MORN3	Q6PF18	240 aa	Predicted RBP	7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	TRPT1	Q86TN4	253 aa	Known RBP	7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	ZNF555	Q8NEP9	628 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	SCARB1	Q8WTV0	552 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	SRSF8	Q9BRL6	282 aa	Known RBP	7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	C9orf16	Q9BUW7	83 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	COMMD5	Q9GZQ3	224 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	MS4A6A	Q9H2W1	248 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	TMEM14B	Q9NUH8	114 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	BET1L	Q9NYM9	111 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	OR2W1	Q9Y3N9	320 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	LRP1B	Q9NZR2	4599 aa		7.51	□□□□□ -1.21
CLDND1-231	ENST00000515620	TRAV14DV4	A0A0A6YYC5	116 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	KNCN	A6PVL3	124 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	DENR	O43583	198 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	SLC22A5	O76082	557 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	HLA-DQB1	P01920	261 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	EIF4E	P06730	217 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	TALDO1	P37837	337 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	RPL11	P62913	178 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	REL	Q04864	619 aa	Predicted RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	WT1-AS	Q06250	92 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	EIF4EBP1	Q13541	118 aa	Predicted RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	SSX1	Q16384	188 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	RNF212	Q495C1	297 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	ZNF367	Q7RTV3	350 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	MFSD4A	Q8N468	514 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	MS4A15	Q8N5U1	240 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	FAM3D	Q96BQ1	224 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	DGCR14	Q96DF8	476 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	OR10C1	Q96KK4	312 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	ATP6V0B	Q99437	205 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	QTRT1	Q9BXR0	403 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	RABAC1	Q9UI14	185 aa		7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	AK6	Q9Y3D8	172 aa	Known RBP	7.5	□□□□□ -1.21
CLDND1-231	ENST00000515620	IGHV3-66	A0A0C4DH42	116 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	TMEM272	A0A1B0GTI8	110 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	EPM2A	B3EWF7	344 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620		K7EIM0	57 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	MFNG	O00587	321 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	ST8SIA3	O43173	380 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	ATP8B1	O43520	1251 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	SERPINE2	P07093	398 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	CTSG	P08311	255 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	UCHL1	P09936	223 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	INAFM2	P0DMQ5	153 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	GADD45A	P24522	165 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	C2orf76	Q3KRA6	126 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620		Q6ZS49	121 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	CSNK1G2-AS1	Q8NCQ2	148 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	ST8SIA2	Q92186	375 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	CENPO	Q9BU64	300 aa		7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	F11R	Q9Y624	299 aa	Known RBP	7.49	□□□□□ -1.21
CLDND1-231	ENST00000515620	UPK2	O00526	184 aa		7.48	□□□□□ -1.21
CLDND1-231	ENST00000515620	TNFSF12	O43508	249 aa		7.48	□□□□□ -1.21
CLDND1-231	ENST00000515620	APOH	P02749	345 aa	Predicted RBP	7.48	□□□□□ -1.21
CLDND1-231	ENST00000515620	CD5	P06127	495 aa		7.48	□□□□□ -1.21
CLDND1-231	ENST00000515620	TRAPPC2	P0DI81	140 aa		7.48	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms