RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 MDKP21741 143 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 VAMP1P23763 118 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 RPL27AP46776 148 aaKnown RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 CCR6P51684 374 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 SUB1P53999 127 aaKnown RBP eCLIP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 BRWD1-AS2P59051 145 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 LINC00205P59089 165 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 HSPE1P61604 102 aaKnown RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 ERHP84090 104 aaKnown RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TNXAQ16473 311 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 OR2B11Q5JQS5 317 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 UNQ5815/PRO19632Q6UWF5 114 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TMED4Q7Z7H5 227 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 C1QL4Q86Z23 238 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 MINDY2Q8NBR6 621 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 ABHD5Q8WTS1 349 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 SEC22AQ96IW7 307 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 USMG5Q96IX5 58 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 CLCC1Q96S66 551 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 ZNF430Q9H8G1 570 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 ENY2Q9NPA8 101 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 PARP11Q9NR21 331 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TMEM140Q9NV12 185 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 COA4Q9NYJ1 87 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 FOXA2Q9Y261 457 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 VSIG4Q9Y279 399 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TSSC4Q9Y5U2 329 aaPredicted RBP4.79□□□□□ -1.64
HMGCL-206ENST00000496907 NOTCH3Q9UM47 2321 aa4.79□□□□□ -1.64
HMGCL-206ENST00000496907 TCRBV4S1A1TA0A5B7 111 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 C9orf170A2RU37 121 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 MSGN1A6NI15 193 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 NPIPB5A8MRT5 1133 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SNRPGP15A8MWD9 76 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 FAM90A26D6RGX4 464 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 INS-IGF2F8WCM5 200 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 FCN1O00602 326 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 MED6O75586 246 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 PTTG1O95997 202 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 OR4E1P0C645 316 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 OR9G9P0C7N8 305 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 DEFA4P12838 97 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 CNTFRP26992 372 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 PPIFP30405 207 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 G6PCP35575 357 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 CDX1P47902 265 aaPredicted RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SPCS3P61009 180 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 GNB1P62873 340 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 RPP30P78346 268 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 CD83Q01151 205 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 DCTN2Q13561 401 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 TMEM187Q14656 261 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SP6Q3SY56 376 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 TMEM268Q5VZI3 342 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SSX9Q7RTT3 188 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 LYG2Q86SG7 212 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 NDUFA11Q86Y39 141 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SELENOHQ8IZQ5 122 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 TTC9CQ8N5M4 171 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 RNF152Q8N8N0 203 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 ADAD2Q8NCV1 583 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 LFNGQ8NES3 379 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 OR4F17Q8NGA8 305 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 SRSF12Q8WXF0 261 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 MRGPRFQ96AM1 343 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 UBE2E2Q96LR5 201 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 OR4F4Q96R69 305 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 ATP6V0BQ99437 205 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 CITED1Q99966 193 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 MARVELD1Q9BSK0 173 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 QTRT1Q9BXR0 403 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 C20orf85Q9H1P6 137 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 HIPK2Q9H2X6 1198 aa4.78□□□□□ -1.64
HMGCL-206ENST00000496907 GAR1Q9NY12 217 aaKnown RBP4.78□□□□□ -1.64
HMGCL-206ENST00000496907 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 TEX50A0A1B0GTY4 177 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 FAM223BA6NKX1 122 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 C15orf61A6NNL5 157 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 INMT-MINDY4F8WBC2 141 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 CORTO00230 105 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 ATP6V0E1O15342 81 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SCAF4O95104 1147 aaKnown RBP4.77□□□□□ -1.65
HMGCL-206ENST00000496907 IFNA17P01571 189 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 IGLV1-40P01703 118 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 HLA-AP01891 365 aaKnown RBP4.77□□□□□ -1.65
HMGCL-206ENST00000496907 CRYGCP07315 174 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SULT1A3P0DMM9 295 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SULT1A4P0DMN0 295 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 PSMB8P28062 276 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SNCAP37840 140 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 RAB9AP51151 201 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SUPT4H1P63272 117 aaKnown RBP4.77□□□□□ -1.65
HMGCL-206ENST00000496907 CYCSP99999 105 aaKnown RBP4.77□□□□□ -1.65
HMGCL-206ENST00000496907 PPP1R1AQ13522 171 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 SMCO1Q147U7 214 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 TATDN3Q17R31 274 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 C2orf68Q2NKX9 166 aa4.77□□□□□ -1.65
HMGCL-206ENST00000496907 KLK9Q2XQG4 91 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms