RNA–Protein interactions for RNA: ENST00000489261.1

ITSN1-231, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 1,108 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-231ENST00000489261 CLRN3Q8NCR9 226 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 CLDND2Q8NHS1 167 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 SPOCK3Q9BQ16 436 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 MS4A7Q9GZW8 240 aaPredicted RBP8.8□□□□□ -1
ITSN1-231ENST00000489261 NDUFA4L2Q9NRX3 87 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 RFNGQ9Y644 331 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 FBN2P35556 2912 aa8.8□□□□□ -1
ITSN1-231ENST00000489261 ARFGEF3Q5TH69 2177 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 USF3Q68DE3 2245 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 LOC105371242A0A075B767 164 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 A6NNC1 897 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 C9JQL5 133 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 BUB1B-PAK6H3BSN5 160 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 RRHO14718 337 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 GPX4P36969 197 aaPredicted RBP8.79□□□□□ -1
ITSN1-231ENST00000489261 GPR6P46095 362 aaPredicted RBP8.79□□□□□ -1
ITSN1-231ENST00000489261 EFNA4P52798 201 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 CCL20P78556 96 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 GUCA2BQ16661 112 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 SPINK9Q5DT21 86 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 FFAR4Q5NUL3 377 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 AVPI1Q5T686 147 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 OR10G9Q8NGN4 311 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 OR10G7Q8NGN6 311 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 CACNG8Q8WXS5 425 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 RCC1LQ96I51 464 aaKnown RBP8.79□□□□□ -1
ITSN1-231ENST00000489261 SSBP3Q9BWW4 388 aaPredicted RBP8.79□□□□□ -1
ITSN1-231ENST00000489261 INSIG2Q9Y5U4 225 aa8.79□□□□□ -1
ITSN1-231ENST00000489261 LOC102723971A0A1B0GUV8 181 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 MAP1LC3B2A6NCE7 125 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 CA2P00918 260 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 SRP19P09132 144 aaKnown RBP8.78□□□□□ -1
ITSN1-231ENST00000489261 CEACAM3P40198 252 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 COMPP49747 757 aaPredicted RBP8.78□□□□□ -1
ITSN1-231ENST00000489261 ICAM4Q14773 271 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 BSXQ3C1V8 233 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 TEPPQ6URK8 271 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 TREML4Q6UXN2 200 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 MMD2Q8IY49 270 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 RPP25LQ8N5L8 163 aaKnown RBP8.78□□□□□ -1
ITSN1-231ENST00000489261 OR11H6Q8NGC7 330 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 MAP1LC3BQ9GZQ8 125 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 TUBA4BQ9H853 241 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 MANBALQ9NQG1 85 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 VAX2Q9UIW0 290 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 APCP25054 2843 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 CENPEQ02224 2701 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 TEX15Q9BXT5 2789 aa8.78□□□□□ -1
ITSN1-231ENST00000489261 DCHS2Q6V1P9 2916 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 SMCO3A2RU48 225 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 OOSP1A8MZH6 123 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 SEC14L6B5MCN3 397 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 LY6LH3BQJ8 138 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 IGLV2-23P01705 113 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 BCL2P10415 239 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 PRTN3P24158 256 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 RPL29P47914 159 aaKnown RBP8.77□□□□□ -1.01
ITSN1-231ENST00000489261 PSMB3P49720 205 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 ELLP55199 621 aaPredicted RBP8.77□□□□□ -1.01
ITSN1-231ENST00000489261 RHEBQ15382 184 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 ZNF726P1Q15940 193 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 ACSM6Q6P461 480 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 LCN15Q6UWW0 184 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 TMEM144Q7Z5S9 345 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 RNASEH2CQ8TDP1 164 aaKnown RBP8.77□□□□□ -1.01
ITSN1-231ENST00000489261 RPEQ96AT9 228 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 RARRES2Q99969 163 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 C19orf24Q9BVV8 132 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 HINT2Q9BX68 163 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 VSIRQ9H7M9 311 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 UBTD1Q9HAC8 227 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 SMCO4Q9NRQ5 59 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 ZNRD1Q9P1U0 126 aa8.77□□□□□ -1.01
ITSN1-231ENST00000489261 LSM4Q9Y4Z0 139 aaKnown RBP8.77□□□□□ -1.01
ITSN1-231ENST00000489261 IGHV1-3A0A0C4DH29 117 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 A0A1W2PPV4 95 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 ENSAO43768 121 aaKnown RBP8.76□□□□□ -1.01
ITSN1-231ENST00000489261 CRYGBP07316 175 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 RNASE2P10153 161 aaKnown RBP8.76□□□□□ -1.01
ITSN1-231ENST00000489261 HTR1DP28221 377 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 REG1BP48304 166 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 HAGHQ16775 308 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 SLC35E3Q7Z769 313 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 MOB3BQ86TA1 216 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 NANPQ8TBE9 248 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 RXFP4Q8TDU9 374 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 TMEM170AQ8WVE7 144 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 TXNDC17Q9BRA2 123 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
ITSN1-231ENST00000489261 GNG13Q9P2W3 67 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 DPM3Q9P2X0 92 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 ONECUT1Q9UBC0 465 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 NOTCH2Q04721 2471 aa8.76□□□□□ -1.01
ITSN1-231ENST00000489261 CSMD2Q7Z408 3487 aa8.75□□□□□ -1.01
ITSN1-231ENST00000489261 YLPM1P49750 1951 aaKnown RBP8.75□□□□□ -1.01
ITSN1-231ENST00000489261 PDZD2O15018 2839 aa8.75□□□□□ -1.01
ITSN1-231ENST00000489261 A0A1B0GV50 99 aa8.75□□□□□ -1.01
ITSN1-231ENST00000489261 B4DEV8 164 aa8.75□□□□□ -1.01
ITSN1-231ENST00000489261 C22orf46C9J442 243 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms