RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 RARRES2Q99969 163 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 NIT2Q9NQR4 276 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 NAV3Q8IVL0 2385 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 CA2P00918 260 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 IGLV2-23P01705 113 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 PPT1P50897 306 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 EFNA4P52798 201 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 RAB2AP61019 212 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 KLRD1Q13241 179 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 VWC2Q2TAL6 325 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 ACSM6Q6P461 480 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 SLC24A4Q8NFF2 622 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 TPSG1Q9NRR2 321 aa13.48□□□□□ -0.25
USHBP1-203ENST00000431146 MAP1AP78559 2803 aaPredicted RBP13.47□□□□□ -0.25
USHBP1-203ENST00000431146 PRSS46E5RG02 174 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 E7EUB6 86 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 SLC25A17O43808 307 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 IGKV1D-33P01593 117 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 IGKV1-33P01594 117 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 RBP4P02753 201 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 PAX6P26367 422 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 ZFP36P26651 326 aaKnown RBP13.47□□□□□ -0.25
USHBP1-203ENST00000431146 CD1BP29016 333 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 PRCDQ00LT1 54 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 TLE4Q04727 773 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 LDLRAD2Q5SZI1 272 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 LCN15Q6UWW0 184 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 MOB3BQ86TA1 216 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 TNFRSF14Q92956 283 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 PCGF1Q9BSM1 259 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 NPCDR1Q9BY65 106 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 PLEKHA3Q9HB20 300 aa13.47□□□□□ -0.25
USHBP1-203ENST00000431146 hCG_1809904A0A1W2PP81 198 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PPE2 198 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PR64 198 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PRD5 423 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PRF3 423 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PRM7 423 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 A0A1W2PRV1 198 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 NPY1RP25929 384 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 CNTFRP26992 372 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 FGF8P55075 233 aaPredicted RBP13.46□□□□□ -0.25
USHBP1-203ENST00000431146 SERF2P84101 59 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 C10orf55Q5SWW7 151 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 COMMD1Q8N668 190 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 SPG11Q96JI7 2443 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 ZNF257Q9Y2Q1 563 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 DMRT1Q9Y5R6 373 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 INSIG2Q9Y5U4 225 aa13.46□□□□□ -0.25
USHBP1-203ENST00000431146 IGHV1-3A0A0C4DH29 117 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 LY86O95711 162 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 DEFA4P12838 97 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 RAB11AP62491 216 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 RPL8P62917 257 aaKnown RBP13.46□□□□□ -0.26
USHBP1-203ENST00000431146 HAGHQ16775 308 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 TMEM41BQ5BJD5 291 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 BEND2Q8NDZ0 799 aa13.46□□□□□ -0.26
USHBP1-203ENST00000431146 RCC1LQ96I51 464 aaKnown RBP13.46□□□□□ -0.26
USHBP1-203ENST00000431146 MDKP21741 143 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-203ENST00000431146 SSX2Q16385 188 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 RNF212Q495C1 297 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 C10orf91Q5T1B1 145 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 SEC11CQ9BY50 192 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 BPESC1Q9GZL8 116 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 COMMD5Q9GZQ3 224 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 ZNF430Q9H8G1 570 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-203ENST00000431146 CSMD2Q7Z408 3487 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 HMGB3O15347 200 aaKnown RBP13.45□□□□□ -0.26
USHBP1-203ENST00000431146 MC5RP33032 325 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 LCN2P80188 198 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 COTL1Q14019 142 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 PEA15Q15121 130 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 FFAR4Q5NUL3 377 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 SP5Q6BEB4 398 aaPredicted RBP13.45□□□□□ -0.26
USHBP1-203ENST00000431146 RPP25LQ8N5L8 163 aaKnown RBP13.45□□□□□ -0.26
USHBP1-203ENST00000431146 LFNGQ8NES3 379 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 RPEQ96AT9 228 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 NEU1Q99519 415 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 FKBP11Q9NYL4 201 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 TIMM9Q9Y5J7 89 aa13.45□□□□□ -0.26
USHBP1-203ENST00000431146 USF1P22415 310 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-203ENST00000431146 DEFA6Q01524 100 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 ARSJQ5FYB0 599 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-203ENST00000431146 TREML4Q6UXN2 200 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 CENPVQ7Z7K6 275 aaPredicted RBP13.44□□□□□ -0.26
USHBP1-203ENST00000431146 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 OR5B3Q8NH48 314 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 TMEM167AQ8TBQ9 72 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 PBDC1Q9BVG4 233 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 WDR83OSQ9Y284 106 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 CARHSP1Q9Y2V2 147 aaKnown RBP13.44□□□□□ -0.26
USHBP1-203ENST00000431146 CELSR2Q9HCU4 2923 aa13.44□□□□□ -0.26
USHBP1-203ENST00000431146 FAM74A7A6NL05 159 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 OVOL3O00110 214 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 RAB4AP20338 218 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 FAM74A3Q4VXF1 159 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 SLC16A13Q7RTY0 426 aa13.43□□□□□ -0.26
USHBP1-203ENST00000431146 NKX6-2Q9C056 277 aaPredicted RBP13.43□□□□□ -0.26
USHBP1-203ENST00000431146 SLC25A22Q9H936 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms