RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 VAMP2P63027 116 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 ZNF418Q8TF45 676 aaPredicted RBP17.07■□□□□ 0.32
ABCF3-202ENST00000421340 SRSF12Q8WXF0 261 aaKnown RBP17.07■□□□□ 0.32
ABCF3-202ENST00000421340 PLEKHA3Q9HB20 300 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 ENY2Q9NPA8 101 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 OR5AC2Q9NZP5 309 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 MBD2Q9UBB5 411 aa17.07■□□□□ 0.32
ABCF3-202ENST00000421340 E7EUB6 86 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 TSC22D2O75157 780 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 CRLF1O75462 422 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 RPL23AP62750 156 aaKnown RBP17.06■□□□□ 0.32
ABCF3-202ENST00000421340 GNB1P62873 340 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 NOXA1Q86UR1 476 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 OR11H4Q8NGC9 324 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 U3KQ87 197 aa17.06■□□□□ 0.32
ABCF3-202ENST00000421340 HIVEP1P15822 2718 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 TLN2Q9Y4G6 2542 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 A0A1B0GW64 132 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 TMEM50AO95807 157 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 OPN1MWP04001 364 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 FAM157CP0CG43 387 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 OPN1MW2P0DN77 364 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 OPN1MW3P0DN78 364 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 HOXA1P49639 335 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-202ENST00000421340 RPP30P78346 268 aaKnown RBP17.05■□□□□ 0.32
ABCF3-202ENST00000421340 ERHP84090 104 aaKnown RBP17.05■□□□□ 0.32
ABCF3-202ENST00000421340 C10orf55Q5SWW7 151 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 Q71RC1 249 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-202ENST00000421340 ZNF546Q86UE3 836 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 ARPC1AQ92747 370 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 TMEM68Q96MH6 324 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 HINT2Q9BX68 163 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 HEYLQ9NQ87 328 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-202ENST00000421340 HIVEP2P31629 2446 aa17.05■□□□□ 0.32
ABCF3-202ENST00000421340 MSGN1A6NI15 193 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 TEX22C9J3V5 150 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 KCNAB3O43448 404 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 IGHG2P01859 326 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 JMJD8Q96S16 334 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 LYRM2Q9NU23 88 aaPredicted RBP17.04■□□□□ 0.32
ABCF3-202ENST00000421340 PSENENQ9NZ42 101 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 TNFSF18Q9UNG2 199 aa17.04■□□□□ 0.32
ABCF3-202ENST00000421340 FXYD6-FXYD2A0A087WZ82 144 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 IGLC7A0M8Q6 106 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 IAPPP10997 89 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 CRIP2P52943 208 aaPredicted RBP17.03■□□□□ 0.32
ABCF3-202ENST00000421340 HILS1P60008 231 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 RPL15P61313 204 aaKnown RBP17.03■□□□□ 0.32
ABCF3-202ENST00000421340 SPINK9Q5DT21 86 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 OR2C3Q8N628 320 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 DCUN1D4Q92564 292 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 HSPB9Q9BQS6 159 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 ZNF580Q9UK33 172 aa17.03■□□□□ 0.32
ABCF3-202ENST00000421340 DNAJC9-AS1A6NH13 148 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 HNRNPCP07910 306 aaKnown RBP eCLIP17.02■□□□□ 0.32
ABCF3-202ENST00000421340 EGR2P11161 476 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-202ENST00000421340 NUP62P37198 522 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-202ENST00000421340 HTR2BP41595 481 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 WT1-ASQ06250 92 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 BSXQ3C1V8 233 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 INO80EQ8NBZ0 244 aaPredicted RBP17.02■□□□□ 0.32
ABCF3-202ENST00000421340 OR10W1Q8NGF6 305 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 SGMS2Q8NHU3 365 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 AQP10Q96PS8 301 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 NPFFR1Q9GZQ6 430 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 SLC25A31Q9H0C2 315 aa17.02■□□□□ 0.32
ABCF3-202ENST00000421340 SCAF4O95104 1147 aaKnown RBP17.01■□□□□ 0.31
ABCF3-202ENST00000421340 IGF1P05019 195 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 BLCAPP62952 87 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 ACOT7LQ6ZUV0 252 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 ZNF114Q8NC26 417 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 GRPEL2Q8TAA5 225 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 TNFRSF19Q9NS68 423 aa17.01■□□□□ 0.31
ABCF3-202ENST00000421340 STRAPQ9Y3F4 350 aaKnown RBP17.01■□□□□ 0.31
ABCF3-202ENST00000421340 CELSR1Q9NYQ6 3014 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 OR13C7P0DN81 318 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 HKR1P10072 659 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 RPL12P30050 165 aaKnown RBP17■□□□□ 0.31
ABCF3-202ENST00000421340 SNCAP37840 140 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 CAV2P51636 162 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 SUB1P53999 127 aaKnown RBP eCLIP17■□□□□ 0.31
ABCF3-202ENST00000421340 NDPQ00604 133 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 TMEM267Q0VDI3 215 aaPredicted RBP17■□□□□ 0.31
ABCF3-202ENST00000421340 AKIRIN2Q53H80 203 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 C2orf83Q53S99 150 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 TMEM14EPQ6UXP3 125 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 TTC9CQ8N5M4 171 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 TMEM252Q8N6L7 170 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 PRSS22Q9GZN4 317 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 ESM1Q9NQ30 184 aa17■□□□□ 0.31
ABCF3-202ENST00000421340 NPIPB5A8MRT5 1133 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 IFNA10P01566 189 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 CRYGCP07315 174 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 RNASE1P07998 156 aaKnown RBP16.99■□□□□ 0.31
ABCF3-202ENST00000421340 OR2F1Q13607 317 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 ZNF345Q14585 488 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 SPANXN5Q5MJ07 72 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 PVRIGQ6DKI7 326 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 SLC35E3Q7Z769 313 aa16.99■□□□□ 0.31
ABCF3-202ENST00000421340 SLC24A4Q8NFF2 622 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms