RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 hCG_1818297A0A087WSY0 165 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 A0A087WUU8 490 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 A8MT66 165 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 CLDN25C9JDP6 229 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 PPP5D1E7EU14 171 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 HMGB3O15347 200 aaKnown RBP1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 IGKV1-5P01602 117 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 IDO1P14902 403 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 GABRA4P48169 554 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 RHOBP62745 196 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 HOXC5Q00444 222 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 DHRS2Q13268 280 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 Q6ZS49 121 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 GRINAQ7Z429 371 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 LYPD6Q86Y78 171 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 SLC25A40Q8TBP6 338 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 RPS4Y2Q8TD47 263 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 HIST1H2BAQ96A08 127 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 C12orf43Q96C57 262 aaKnown RBP1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 TTTY13Q9BZ97 58 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 NKX6-2Q9C056 277 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 FAM96AQ9H5X1 160 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 PARVBQ9HBI1 364 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 BIN3Q9NQY0 253 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 PRTFDC1Q9NRG1 225 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 TAS2R7Q9NYW3 318 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 AK3Q9UIJ7 227 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 PYCARDQ9ULZ3 195 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 CCDC18Q5T9S5 1454 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 BICRAQ9NZM4 1560 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 CTTNBP2Q8WZ74 1663 aa1.67□□□□□ -2.14
HMGB1P49-201ENST00000418882 NAIPQ13075 1403 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 MIA2Q96PC5 1412 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 ARHGEF11O15085 1522 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 CUX1P39880 1505 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 MUC6Q6W4X9 2439 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 C17orf98A8MV24 154 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 C3orf84H3BNL1 204 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 I3L521 148 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 J3QRE1 110 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 CRYZL1O95825 349 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SOD1P00441 154 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 C8GP07360 202 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 LGALS1P09382 135 aaKnown RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SMIM17P0DL12 118 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SMIM10L2AP0DMW4 78 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SMIM10L2BP0DMW5 78 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 NPPCP23582 126 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SRIP30626 198 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 ATP5G3P48201 142 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 ZNF80P51504 273 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 TAS2R45P59539 299 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 NCALDP61601 193 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 TBPL1P62380 186 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 FKBP1AP62942 108 aaKnown RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SARNPP82979 210 aaKnown RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 GNA12Q03113 381 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 GRK1Q15835 563 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 KRTAP25-1Q3LHN0 102 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 IBA57Q5T440 356 aaKnown RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 TMEM78Q5T7P6 136 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 RASL11AQ6T310 242 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 AMTNQ6UX39 209 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SDIM1Q6ZPB5 146 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 STX19Q8N4C7 294 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 ST6GALNAC3Q8NDV1 305 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 OR52R1Q8NGF1 315 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 GNPDA2Q8TDQ7 276 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 PYDC1Q8WXC3 89 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 RMND5BQ96G75 393 aaPredicted RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 BATF3Q9NR55 127 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 CRCT1Q9UGL9 99 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 TMEM56-RWDD3S4R434 201 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 KTN1Q86UP2 1357 aaKnown RBP1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 FYCO1Q9BQS8 1478 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 SYNMO15061 1565 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 KIF21AQ7Z4S6 1674 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 COL18A1P39060 1754 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 DSCAML1Q8TD84 2053 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 LTBP2Q14767 1821 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 EFCAB5A4FU69 1503 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 MYOM3Q5VTT5 1437 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 FGD6Q6ZV73 1430 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 CASKIN1Q8WXD9 1431 aa1.66□□□□□ -2.14
HMGB1P49-201ENST00000418882 THOC2Q8NI27 1593 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TCOF1Q13428 1488 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 GAPVD1Q14C86 1478 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TONSLQ96HA7 1378 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TRAV41A0A0B4J266 112 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TRAV4A0A0B4J268 109 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 LOC102725191A0A1B0GVB3 256 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TMEM269A0A1B0GVZ9 245 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 A0A1W2PRE2 83 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SLC17A3O00476 420 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 ARPC5O15511 151 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 LY6HO94772 140 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 CSN2P05814 226 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 SRP19P09132 144 aaKnown RBP1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 TFPTP0C1Z6 253 aa1.65□□□□□ -2.15
HMGB1P49-201ENST00000418882 CCL5P13501 91 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms