RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 ZNF433Q8N7K0 673 aaPredicted RBP1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 NUP35Q8NFH5 326 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 OR5C1Q8NGR4 320 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 OR13C4Q8NGS5 318 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 FNDC9Q8TBE3 224 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 H1FXQ92522 213 aaKnown RBP1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 VPS25Q9BRG1 176 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 MND1Q9BWT6 205 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 KRTAP1-5Q9BYS1 174 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 CACYBPQ9HB71 228 aaKnown RBP1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 TP73-AS1Q9UF72 201 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 OR5V1Q9UGF6 321 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 TRAPPC2LQ9UL33 140 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 LAMTOR2Q9Y2Q5 125 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 LINC00588Q9Y4M8 146 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 U3KQK5 164 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 CRB1P82279 1406 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 SSH2Q76I76 1423 aa1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 BAZ2AQ9UIF9 1905 aaKnown RBP1.38□□□□□ -2.19
HMGN2P39-201ENST00000398005 ERCC6Q03468 1493 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 RPRD2Q5VT52 1461 aaKnown RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TRAV36DV7A0A075B6V5 113 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 A0A087WX48 190 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 BORCS7-ASMTA0A0B4J1R7 106 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGKV1D-43A0A0B4J1Z2 117 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TRAV38-1A0A0B4J264 116 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 C7orf66A4D0T2 115 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 GRIFINA4D1Z8 144 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 CYSRT1A8MQ03 144 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LECT2O14960 151 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LEPROTO15243 131 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF73O43830 326 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 NDUFB2O95178 105 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGHV1-69P01742 117 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGLV7-43P04211 117 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 DBIP07108 87 aaKnown RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 CISD3P0C7P0 127 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF286BP0CG31 522 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 UBBP0CG47 229 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGHV3-30-3P0DP02 117 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 RPS3P23396 243 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 CRHBPP24387 322 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 SRIP30626 198 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LPAR6P43657 344 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 VEGFCP49767 419 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 POLR2HP52434 150 aaKnown RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 FXYD7P58549 80 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TAS2R30P59541 319 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 RPS11P62280 158 aaKnown RBP eCLIP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 RPS28P62857 69 aaKnown RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 RRN3P1Q2M238 152 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LGALS9BQ3B8N2 356 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LDLRAD2Q5SZI1 272 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 Q5W150 140 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LGALS9CQ6DKI2 356 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 SLC25A34Q6PIV7 304 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF322Q6U7Q0 402 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 HRCT1Q6UXD1 115 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZFP2Q6ZN57 461 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF705AQ6ZN79 300 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 KTN1-AS1Q86SY8 53 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TRAPPC6BQ86SZ2 158 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 BPIFA4PQ86YQ2 179 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LRRC18Q8N456 261 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 LINC00612Q8N6U2 182 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 CNEP1R1Q8N9A8 125 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 SPANXA2-OT1Q8N9U9 137 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TMEM229BQ8NBD8 167 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 BPIFB6Q8NFQ5 453 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 PPTC7Q8NI37 304 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 UBALD1Q8TB05 177 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ISOC1Q96CN7 298 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ADAT3Q96EY9 351 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 BORCS8Q96FH0 119 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF285Q96NJ3 590 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 DERL1Q9BUN8 251 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 KRTAP2-2Q9BYT5 123 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TTTY13Q9BZ97 58 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 VCXQ9H320 206 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 C11orf1Q9H5F2 150 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 SLC39A9Q9NUM3 307 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 HSPB8Q9UJY1 196 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 KLK5Q9Y337 293 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 NUBP2Q9Y5Y2 271 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 FMN1Q68DA7 1419 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 PTPRJQ12913 1337 aa1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 TET2Q6N021 2002 aaPredicted RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 BAZ1BQ9UIG0 1483 aaKnown RBP1.37□□□□□ -2.19
HMGN2P39-201ENST00000398005 PLXNB3Q9ULL4 1909 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 DYSFO75923 2080 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 RFX7Q2KHR2 1363 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 TCF20Q9UGU0 1960 aaKnown RBP1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGKV1OR2-108A0A075B7D4 117 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 IGHV3-73A0A0B4J1V6 119 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 A0A1B0GX51 115 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 TRDV1A0A1B0GX56 115 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 DHRS12A0PJE2 317 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 TLCD2A6NGC4 264 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 ZNF860A6NHJ4 632 aa1.36□□□□□ -2.19
HMGN2P39-201ENST00000398005 FABP5P3A8MUU1 101 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms