RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 HILS1P60008 231 aa18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 RPL23AP62750 156 aaKnown RBP18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 ZFP69Q49AA0 526 aa18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 TNFRSF19Q9NS68 423 aa18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 MBD2Q9UBB5 411 aa18.69■□□□□ 0.58
TSPAN4-202ENST00000397396 HIVEP1P15822 2718 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 F8P00451 2351 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 TRAV14DV4A0A0A6YYC5 116 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 LYL1P12980 280 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 ERHP84090 104 aaKnown RBP18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 C10orf55Q5SWW7 151 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 ABHD5Q8WTS1 349 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 SMIM8Q96KF7 97 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 TMEM68Q96MH6 324 aa18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 HEYLQ9NQ87 328 aaPredicted RBP18.68■□□□□ 0.58
TSPAN4-202ENST00000397396 TSC22D2O75157 780 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 SCAF4O95104 1147 aaKnown RBP18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 OPN1MWP04001 364 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 AMY1AP04745 511 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 OPN1MW2P0DN77 364 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 OPN1MW3P0DN78 364 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 NUP62P37198 522 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 P2RY1P47900 373 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 ATP5IP56385 69 aaPredicted RBP18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 GRPEL2Q8TAA5 225 aa18.67■□□□□ 0.58
TSPAN4-202ENST00000397396 FXYD6-FXYD2A0A087WZ82 144 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 TRIM77I1YAP6 450 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 IAPPP10997 89 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 MYOD1P15172 320 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 VDAC2P45880 294 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 SSBP2P81877 361 aaPredicted RBP18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 NOXA1Q86UR1 476 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 DCUN1D4Q92564 292 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 HYLS1Q96M11 299 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 PRSS22Q9GZN4 317 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 U3KQ87 197 aa18.66■□□□□ 0.58
TSPAN4-202ENST00000397396 G3V3Q6 166 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 H0YIZ8 118 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 IGHG2P01859 326 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 RNASE1P07998 156 aaKnown RBP18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 TMEM267Q0VDI3 215 aaPredicted RBP18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 SPINK9Q5DT21 86 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 C9orf152Q5JTZ5 239 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 TMEM65Q6PI78 240 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 SLC35E3Q7Z769 313 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 SGMS2Q8NHU3 365 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 HSPB9Q9BQS6 159 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 RNF126Q9BV68 326 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 PARP11Q9NR21 331 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 PSENENQ9NZ42 101 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 OR5AC2Q9NZP5 309 aa18.65■□□□□ 0.58
TSPAN4-202ENST00000397396 TNCP24821 2201 aa18.64■□□□□ 0.58
TSPAN4-202ENST00000397396 MSGN1A6NI15 193 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 CGB1A6NKQ9 187 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 TEX22C9J3V5 150 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 SMLR1H3BR10 107 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 HTR2BP41595 481 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 CRIP2P52943 208 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 SUB1P53999 127 aaKnown RBP eCLIP18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 INO80EQ8NBZ0 244 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 SLC25A31Q9H0C2 315 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 C11orf1Q9H5F2 150 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 LYRM2Q9NU23 88 aaPredicted RBP18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 ZNF580Q9UK33 172 aa18.64■□□□□ 0.57
TSPAN4-202ENST00000397396 IGLC7A0M8Q6 106 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 HMSDA8MTL9 139 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 TCF21O43680 179 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 SNCAP37840 140 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 CAV2P51636 162 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 NDPQ00604 133 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 CD300CQ08708 224 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 Q5BKY6 102 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 ZNF546Q86UE3 836 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 OR2C3Q8N628 320 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 SLC24A4Q8NFF2 622 aa18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 STRAPQ9Y3F4 350 aaKnown RBP18.63■□□□□ 0.57
TSPAN4-202ENST00000397396 ANK3Q12955 4377 aaKnown RBP18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 E7EUB6 86 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 AP4M1O00189 453 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 CYB5BO43169 146 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 IFNA10P01566 189 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 IGF1P05019 195 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 OR13C7P0DN81 318 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 OR1L6Q8NGR2 347 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 ESM1Q9NQ30 184 aa18.62■□□□□ 0.57
TSPAN4-202ENST00000397396 ATP6V0E1O15342 81 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 TSPAN9O75954 239 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 CRYBA1P05813 215 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 NPY1RP25929 384 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 RAB11AP62491 216 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 UBA52P62987 128 aaKnown RBP18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 AKIRIN2Q53H80 203 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 STX12Q86Y82 276 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 ZNF114Q8NC26 417 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 OR10W1Q8NGF6 305 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 DUX5Q96PT3 197 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 TNFSF18Q9UNG2 199 aa18.61■□□□□ 0.57
TSPAN4-202ENST00000397396 A0A1B0GW64 132 aa18.6■□□□□ 0.57
TSPAN4-202ENST00000397396 SH2D7A6NKC9 451 aaPredicted RBP18.6■□□□□ 0.57
TSPAN4-202ENST00000397396 NPIPB5A8MRT5 1133 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms