RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 MOB3BQ86TA1 216 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 PNKDQ8N490 385 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 RXFP4Q8TDU9 374 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 RPEQ96AT9 228 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 NDUFA4L2Q9NRX3 87 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 IGLV2-23P01705 113 aa11.31□□□□□ -0.6
TRAIP-201ENST00000331456 RBMS3Q6XE24 437 aaKnown RBP11.31□□□□□ -0.6
TRAIP-201ENST00000331456 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 ZFP92A6NM28 416 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 INS-IGF2F8WCM5 200 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 GOSR1O95249 250 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 SRP19P09132 144 aaKnown RBP11.3□□□□□ -0.6
TRAIP-201ENST00000331456 BCL2P10415 239 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 PMS2P11Q13670 270 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 FAM122CQ6P4D5 195 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 TEPPQ6URK8 271 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 TEX45Q8NA69 505 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 OR4P4Q8NGL7 312 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 SLC25A22Q9H936 323 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 IGHV3-72A0A0B4J1Y9 119 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 SLC25A17O43808 307 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 DLX1P56177 255 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 ARF6P62330 175 aa11.3□□□□□ -0.6
TRAIP-201ENST00000331456 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
TRAIP-201ENST00000331456 ZNF430Q9H8G1 570 aaPredicted RBP11.3□□□□□ -0.6
TRAIP-201ENST00000331456 NBEAQ8NFP9 2946 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 M0R036 132 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
TRAIP-201ENST00000331456 CDC34P49427 236 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-201ENST00000331456 BSXQ3C1V8 233 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 ARSJQ5FYB0 599 aaPredicted RBP11.29□□□□□ -0.6
TRAIP-201ENST00000331456 Q8N7P7 452 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 RAB24Q969Q5 203 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 MGST2Q99735 147 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 GGTLC1Q9BX51 225 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 VAX2Q9UIW0 290 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 LSM4Q9Y4Z0 139 aaKnown RBP11.29□□□□□ -0.6
TRAIP-201ENST00000331456 HIVEP3Q5T1R4 2406 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 ABCA4P78363 2273 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 CHD6Q8TD26 2715 aa11.29□□□□□ -0.6
TRAIP-201ENST00000331456 MALRD1Q5VYJ5 2156 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 A0A1W2PPV4 95 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 RNASE2P10153 161 aaKnown RBP11.28□□□□□ -0.6
TRAIP-201ENST00000331456 CEACAM3P40198 252 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 SUB1P53999 127 aaKnown RBP eCLIP11.28□□□□□ -0.6
TRAIP-201ENST00000331456 PRB3Q04118 309 aaPredicted RBP11.28□□□□□ -0.6
TRAIP-201ENST00000331456 TMEM88Q6PEY1 159 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 MMD2Q8IY49 270 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 OR11H6Q8NGC7 330 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 OR10W1Q8NGF6 305 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 P2RX4Q99571 388 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 PXMP4Q9Y6I8 212 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 SEC14L6B5MCN3 397 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 LY6LH3BQJ8 138 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 PRTN3P24158 256 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 HTR1DP28221 377 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 CEBPGP53567 150 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 AKIRIN2Q53H80 203 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 C1orf122Q6ZSJ8 110 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 KIR3DL3Q8N743 410 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 RNF5Q99942 180 aa11.28□□□□□ -0.6
TRAIP-201ENST00000331456 KALRNO60229 2985 aa11.27□□□□□ -0.6
TRAIP-201ENST00000331456 NDUFS7O75251 213 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 ACTL6BO94805 426 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 MAS1LP35410 378 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 PSMB3P49720 205 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 AWAT1Q58HT5 328 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 TPTE2P1Q5T6R2 138 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 CYB561D1Q8N8Q1 229 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 RPS10P5Q9NQ39 176 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 MANBALQ9NQG1 85 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 SIRT7Q9NRC8 400 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
TRAIP-201ENST00000331456 ITPR1Q14643 2758 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 PKD1L2Q7Z442 2459 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 SNRNP70P08621 437 aaKnown RBP11.26□□□□□ -0.61
TRAIP-201ENST00000331456 PSG5Q15238 335 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 RHEBQ15382 184 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 MIC13Q5XKP0 118 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 TMEM144Q7Z5S9 345 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 RITA1Q96K30 269 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 SMCO4Q9NRQ5 59 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 PUS1Q9Y606 427 aaKnown RBP eCLIP11.26□□□□□ -0.61
TRAIP-201ENST00000331456 HMGB3O15347 200 aaKnown RBP11.26□□□□□ -0.61
TRAIP-201ENST00000331456 IGHV2-5P01817 119 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 FBP1P09467 338 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 GPX4P36969 197 aaPredicted RBP11.26□□□□□ -0.61
TRAIP-201ENST00000331456 RPL29P47914 159 aaKnown RBP11.26□□□□□ -0.61
TRAIP-201ENST00000331456 B2MP61769 119 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 PRSS8Q16651 343 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 CACNG8Q8WXS5 425 aa11.26□□□□□ -0.61
TRAIP-201ENST00000331456 C7orf77A4D0Y5 90 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 YIF1AO95070 293 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 CD69Q07108 199 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 SLC35E3Q7Z769 313 aa11.25□□□□□ -0.61
TRAIP-201ENST00000331456 IQCF2Q8IXL9 164 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms