RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 ENSAO43768 121 aaKnown RBP18.17■□□□□ 0.5
PDLIM2-202ENST00000308354 FAM71F2Q6NXP2 309 aa18.17■□□□□ 0.5
PDLIM2-202ENST00000308354 SMCO3A2RU48 225 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 H3BQ15 152 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 BUB1B-PAK6H3BSN5 160 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 IL3RAP26951 378 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 RHEBQ15382 184 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 TMEM177Q53S58 311 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 OR10G4Q8NGN3 311 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 OR10G9Q8NGN4 311 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 OR10G7Q8NGN6 311 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 OR4C13Q8NGP0 309 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 WDR83OSQ9Y284 106 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 WASHC3Q9Y3C0 194 aa18.16■□□□□ 0.5
PDLIM2-202ENST00000308354 PRSS46E5RG02 174 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 DEFA4P12838 97 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 CRYBG3Q68DQ2 2970 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 ISOC2Q96AB3 205 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 hCG_1809904A0A1W2PP81 198 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 A0A1W2PPE2 198 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 A0A1W2PR64 198 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 A0A1W2PRV1 198 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 KBTBD11O94819 623 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 ZFP36P26651 326 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 PDPNQ86YL7 162 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 OR4P4Q8NGL7 312 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 BET1LQ9NYM9 111 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 PRNDQ9UKY0 176 aa18.15■□□□□ 0.5
PDLIM2-202ENST00000308354 MBP02144 154 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 RBP4P02753 201 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 IFNA4P05014 189 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 TNFRSF14Q92956 283 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 TEX50A0A1B0GTY4 177 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 C17orf112F2Z3M2 114 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 OVOL3O00110 214 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 RAB11AP62491 216 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 KLRD1Q13241 179 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 FAM122CQ6P4D5 195 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 BPESC1Q9GZL8 116 aa18.14■□□□□ 0.49
PDLIM2-202ENST00000308354 CTXND1A0A1B0GTU2 59 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 LDLRAD2Q5SZI1 272 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 TREML4Q6UXN2 200 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 IGFBPL1Q8WX77 278 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 TMPRSS5Q9H3S3 457 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 ENY2Q9NPA8 101 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 MLXQ9UH92 298 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 VPS13CQ709C8 3753 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 IGLV2-23P01705 113 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 CRYBA1P05813 215 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 PAX6P26367 422 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 MOB3BQ86TA1 216 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 C15orf54Q8N8G6 183 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 BEND2Q8NDZ0 799 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 SLC24A4Q8NFF2 622 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 PCGF1Q9BSM1 259 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 INSIG2Q9Y5U4 225 aa18.13■□□□□ 0.49
PDLIM2-202ENST00000308354 A0A1W2PRD5 423 aa18.12■□□□□ 0.49
PDLIM2-202ENST00000308354 A0A1W2PRF3 423 aa18.12■□□□□ 0.49
PDLIM2-202ENST00000308354 A0A1W2PRM7 423 aa18.12■□□□□ 0.49
PDLIM2-202ENST00000308354 OR10W1Q8NGF6 305 aa18.12■□□□□ 0.49
PDLIM2-202ENST00000308354 TPSG1Q9NRR2 321 aa18.12■□□□□ 0.49
PDLIM2-202ENST00000308354 IGHV1-3A0A0C4DH29 117 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 SLC25A17O43808 307 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 IGHV4-39P01824 125 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 NPY1RP25929 384 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 RAB13P51153 203 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 LCN2P80188 198 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 GCSAMLQ5JQS6 135 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 FAM90A2PQ658T7 463 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 RAB24Q969Q5 203 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 NIPSNAP3BQ9BS92 247 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 GGACTQ9BVM4 153 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 ACTR3CQ9C0K3 210 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 VAX2Q9UIW0 290 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 SPG11Q96JI7 2443 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 E7EUB6 86 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 CA2P00918 260 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 MC5RP33032 325 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 PRCDQ00LT1 54 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 RPEQ96AT9 228 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 PLEKHA3Q9HB20 300 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 ZNF257Q9Y2Q1 563 aa18.11■□□□□ 0.49
PDLIM2-202ENST00000308354 WNK2Q9Y3S1 2297 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 IFNA1P01562 189 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 IGHV2-5P01817 119 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 CNTFRP26992 372 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 RPL8P62917 257 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 DLK1P80370 383 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 FLI1Q01543 452 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 C10orf55Q5SWW7 151 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 HIST1H2BAQ96A08 127 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 MGST2Q99735 147 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 COMMD5Q9GZQ3 224 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 TUBA4BQ9H853 241 aa18.1■□□□□ 0.49
PDLIM2-202ENST00000308354 ACOT6Q3I5F7 207 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-202ENST00000308354 FAM208BQ5VWN6 2430 aa18.09■□□□□ 0.49
PDLIM2-202ENST00000308354 MPDU1O75352 247 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 CTRB1P17538 263 aa18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 ARSJQ5FYB0 599 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-202ENST00000308354 CTRB2Q6GPI1 263 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms