RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 PRSS8Q16651 343 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 Q6ZRG5 221 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 HSD17B13Q7Z5P4 300 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 PPP1R27Q86WC6 154 aa12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 METTL1Q9UBP6 276 aaKnown RBP12.62□□□□□ -0.39
HERPUD1-201ENST00000300302 CA2P00918 260 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 IGKV1D-33P01593 117 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 IGKV1-33P01594 117 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 MSMBP08118 114 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 CNTFRP26992 372 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 AKR1C8PQ5T2L2 129 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 OR2T10Q8NGZ9 312 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 TPSG1Q9NRR2 321 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 CRYBG3Q68DQ2 2970 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 B4DSR2 109 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 TEX46H3BTG2 121 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 I3L521 148 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 DLK1P80370 383 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 SERF2P84101 59 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 HES1Q14469 280 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 PLGLAQ15195 96 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 LRRC75A-AS1Q8N1F1 130 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 EIF4E3Q8N5X7 224 aaKnown RBP12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 MARC2Q969Z3 335 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 HRH4Q9H3N8 390 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 KIAA1456Q9P272 454 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 TIMM9Q9Y5J7 89 aa12.61□□□□□ -0.39
HERPUD1-201ENST00000300302 NPFFO15130 113 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 FGF7P21781 194 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 ZNF616Q08AN1 781 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 PJVKQ0ZLH3 352 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 MMDQ15546 238 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 DEFB113Q30KQ7 82 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 C2orf83Q53S99 150 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 OR10W1Q8NGF6 305 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 TMEM170AQ8WVE7 144 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 FBXO7Q9Y3I1 522 aa12.6□□□□□ -0.39
HERPUD1-201ENST00000300302 PRSS46E5RG02 174 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 NBR2O15453 112 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 SAA4P35542 130 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 SUB1P53999 127 aaKnown RBP eCLIP12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 TNXAQ16473 311 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 MRGPRG-AS1Q2M3A8 158 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 BSXQ3C1V8 233 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 IL34Q6ZMJ4 242 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 NPBQ8NG41 125 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 FAM213BQ8TBF2 198 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 EAF1Q96JC9 268 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 FBXL15Q9H469 300 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 RFNGQ9Y644 331 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 RAB19A4D1S5 217 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 C17orf112F2Z3M2 114 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 MPDU1O75352 247 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 SNRNP70P08621 437 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 BRS3P32247 399 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 RPL27AP46776 148 aaKnown RBP12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 HNF4GQ14541 408 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 C10orf55Q5SWW7 151 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 DYNAPQ8N1N2 210 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 ZNF709Q8N972 641 aa12.59□□□□□ -0.39
HERPUD1-201ENST00000300302 SPG11Q96JI7 2443 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 SMCO3A2RU48 225 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 E7EUB6 86 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 FAM106CPP0CH98 169 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 RNASE2P10153 161 aaKnown RBP12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 GATA3P23771 443 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 FHITP49789 147 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 TUSC1Q2TAM9 212 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 BTNL8Q6UX41 500 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 CENPVQ7Z7K6 275 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 C17orf50Q8WW18 174 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 WDR83OSQ9Y284 106 aa12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 ASH1LQ9NR48 2969 aaKnown RBP12.58□□□□□ -0.4
HERPUD1-201ENST00000300302 TRAV20A0A0B4J274 112 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 CGB1A6NKQ9 187 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 FNDC10F2Z333 226 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 NDUFA3O95167 84 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 TSPAN15O95858 294 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 MDKP21741 143 aaPredicted RBP12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 PAX6P26367 422 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 GNB1P62873 340 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 WT1-ASQ06250 92 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 EBI3Q14213 229 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 LYPD6BQ8NI32 183 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 NPCDR1Q9BY65 106 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 NPVFQ9HCQ7 196 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 WNK2Q9Y3S1 2297 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 TNCP24821 2201 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 USP9YO00507 2555 aaPredicted RBP12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 OR13C7P0DN81 318 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 CD24P25063 80 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 UQCC3Q6UW78 93 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 C1orf159Q96HA4 380 aa12.57□□□□□ -0.4
HERPUD1-201ENST00000300302 CSMD2Q7Z408 3487 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms