RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 FAM106CPP0CH98 169 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 PAX6P26367 422 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 SNCAP37840 140 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 ARL16Q0P5N6 197 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 PRSS8Q16651 343 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 ETV3LQ6ZN32 361 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 PPP1R27Q86WC6 154 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 DYNAPQ8N1N2 210 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 C17orf50Q8WW18 174 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 GNPNAT1Q96EK6 184 aaPredicted RBP15.03■□□□□ -0
TNFSF9-201ENST00000245817 EAF1Q96JC9 268 aaPredicted RBP15.03■□□□□ -0
TNFSF9-201ENST00000245817 NDUFA4L2Q9NRX3 87 aa15.03■□□□□ -0
TNFSF9-201ENST00000245817 RPS10-NUDT3A0A1W2PQS6 291 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 RRHO14718 337 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 NBR2O15453 112 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 CRYGBP07316 175 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 CD24P25063 80 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 NPY1RP25929 384 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 TNXAQ16473 311 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 HAPLN4Q86UW8 402 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 FBXL15Q9H469 300 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 TPSG1Q9NRR2 321 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 MED13LQ71F56 2210 aa15.02□□□□□ -0.01
TNFSF9-201ENST00000245817 A0A096LNT2 108 aa15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 TRAV40A0A0B4J280 105 aa15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 ATP5IP56385 69 aaPredicted RBP15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 GNB1P62873 340 aa15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 Q96MF0 132 aa15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 TMEM147Q9BVK8 224 aa15.01□□□□□ -0.01
TNFSF9-201ENST00000245817 IGHV3OR16-10A0A075B7F0 116 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 PMS2P5A8MQ11 134 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 ATP6V1G1O75348 118 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 NMBP08949 121 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 SPP1P10451 314 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 TMEM11P17152 192 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 PJVKQ0ZLH3 352 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 NPBQ8NG41 125 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 UQCC1Q9NVA1 299 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 PDZD2O15018 2839 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 WNK2Q9Y3S1 2297 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 CA2P00918 260 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 TGFAP01135 160 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 ATP6V0CP27449 155 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 RPL27AP46776 148 aaKnown RBP15□□□□□ -0.01
TNFSF9-201ENST00000245817 THNSL2Q86YJ6 484 aa15□□□□□ -0.01
TNFSF9-201ENST00000245817 NCBP2LA6PVI3 153 aaKnown RBP14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 ZNF705EA8MWA4 302 aaPredicted RBP14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 J3QLI3 93 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 SUB1P53999 127 aaKnown RBP eCLIP14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 MAPK1IP1LQ8NDC0 245 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 OR10W1Q8NGF6 305 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 OR2G3Q8NGZ4 309 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 GGACTQ9BVM4 153 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 PARD6GQ9BYG4 376 aaPredicted RBP14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 C1RLQ9NZP8 487 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 FAM96BQ9Y3D0 163 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 SETXQ7Z333 2677 aaKnown RBP14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 CCDC168Q8NDH2 2452 aa14.99□□□□□ -0.01
TNFSF9-201ENST00000245817 UBE2L5PA0A1B0GUS4 154 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 LINC00862A6NCI5 91 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 INS-IGF2F8WCM5 200 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 NDUFA3O95167 84 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 CNIH1O95406 144 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 COMPP49747 757 aaPredicted RBP14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 SULT1A2P50226 295 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 EBI3Q14213 229 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 LRRC75BQ2VPJ9 315 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 C10orf55Q5SWW7 151 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 RUSC1-AS1Q66K80 236 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 SH3BGRL3Q9H299 93 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 PFDN2Q9UHV9 154 aa14.98□□□□□ -0.01
TNFSF9-201ENST00000245817 RAB5CP51148 216 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 C2orf83Q53S99 150 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 BRD3OSQ6XYD6 125 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 AJUBAQ96IF1 538 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 FOXC2Q99958 501 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 WDR61Q9GZS3 305 aaKnown RBP14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 SMCO3A2RU48 225 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 E7EUB6 86 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 FGF16O43320 207 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 PRH1P02810 166 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 FAM157CP0CG43 387 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 OR13C7P0DN81 318 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 BLOC1S1P78537 153 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 MRGPRG-AS1Q2M3A8 158 aa14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 TMEM182Q6ZP80 229 aaPredicted RBP14.97□□□□□ -0.01
TNFSF9-201ENST00000245817 UMAD1C9J7I0 102 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 IGHV4-38-2P0DP08 117 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 DLK1P80370 383 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 RUNX1Q01196 453 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 C5orf64Q2M2E5 130 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 TMEM249Q2WGJ8 235 aa14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 HSD17B13Q7Z5P4 300 aaPredicted RBP14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 TAF15Q92804 592 aaKnown RBP eCLIP14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 SAT2Q96F10 170 aaPredicted RBP14.96□□□□□ -0.01
TNFSF9-201ENST00000245817 PRRC2AP48634 2157 aaKnown RBP14.96□□□□□ -0.02
TNFSF9-201ENST00000245817 FCN1O00602 326 aa14.95□□□□□ -0.02
TNFSF9-201ENST00000245817 IGHV4-31P0DP07 118 aa14.95□□□□□ -0.02
TNFSF9-201ENST00000245817 FGF7P21781 194 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms