RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 KCTD9Q7L273 389 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 HAPLN4Q86UW8 402 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 LYSMD2Q8IV50 215 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 MCFD2Q8NI22 146 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 OSR1Q8TAX0 266 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-207ENST00000591519 RSRP1Q9BUV0 290 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 KRTAP4-9Q9BYQ8 210 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 KLK11Q9UBX7 282 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 RSL24D1Q9UHA3 163 aaKnown RBP7.91□□□□□ -1.14
VPS4B-207ENST00000591519 ADAM30Q9UKF2 790 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 ANAPC10Q9UM13 185 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 U3KQE9 123 aa7.91□□□□□ -1.14
VPS4B-207ENST00000591519 DNAH7Q8WXX0 4024 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 LCE6AA0A183 80 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 RBMXL2O75526 392 aaKnown RBP7.9□□□□□ -1.14
VPS4B-207ENST00000591519 OR2A4O95047 310 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 IGLV2-14P01704 120 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 TRBV12-3P01733 135 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 OR9G9P0C7N8 305 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 NAT1P18440 290 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 TSPAN5P62079 268 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 HAGHQ16775 308 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 VMA21Q3ZAQ7 101 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 LINC00322Q6ZN03 302 aaPredicted RBP7.9□□□□□ -1.14
VPS4B-207ENST00000591519 IDO2Q6ZQW0 420 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 ABHD1Q96SE0 405 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 SLIRPQ9GZT3 109 aaKnown RBP7.9□□□□□ -1.14
VPS4B-207ENST00000591519 SCPEP1Q9HB40 452 aa7.9□□□□□ -1.14
VPS4B-207ENST00000591519 FAM223BA6NKX1 122 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 SULT1C2O00338 296 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 SLC22A5O76082 557 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 RPEL1Q2QD12 228 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 LCN12Q6JVE5 192 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF818PQ6ZRF7 136 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 FAM223AQ8IWN6 122 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 VKORC1L1Q8N0U8 176 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 Q8N402 240 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 MFSD4AQ8N468 514 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 TTC9CQ8N5M4 171 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 OR51H1Q8NH63 302 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 GIMAP1Q8WWP7 306 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 FCAMRQ8WWV6 532 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 SRSF12Q8WXF0 261 aaKnown RBP7.89□□□□□ -1.15
VPS4B-207ENST00000591519 SPATA25Q9BR10 227 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 FXYD6Q9H0Q3 95 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 RBM38Q9H0Z9 239 aaKnown RBP7.89□□□□□ -1.15
VPS4B-207ENST00000591519 PALMDQ9NP74 551 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 AKIP1Q9NQ31 210 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 COA4Q9NYJ1 87 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 PRELID3BQ9Y3B1 194 aa7.89□□□□□ -1.15
VPS4B-207ENST00000591519 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.88□□□□□ -1.15
VPS4B-207ENST00000591519 IFNA6P05013 189 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 APELAP0DMC3 54 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 RPA2P15927 270 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 TNFSF8P32971 234 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 RHOGP84095 191 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF45Q02386 682 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 TNXAQ16473 311 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 PHLDA2Q53GA4 152 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 FAM209BQ5JX69 171 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 AADACL3Q5VUY0 350 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 ADAMTSL5Q6ZMM2 481 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF66Q6ZN08 573 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 SSX9Q7RTT3 188 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 GTSCR1Q86UQ5 136 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 MMD2Q8IY49 270 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 NECAP1Q8NC96 275 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 OR6F1Q8NGZ6 308 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 MOB3AQ96BX8 217 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 WDR89Q96FK6 387 aaPredicted RBP7.88□□□□□ -1.15
VPS4B-207ENST00000591519 PHB2Q99623 299 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 HSD17B10Q99714 261 aaKnown RBP7.88□□□□□ -1.15
VPS4B-207ENST00000591519 SPIN2AQ99865 258 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 SPIN2BQ9BPZ2 258 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF430Q9H8G1 570 aaPredicted RBP7.88□□□□□ -1.15
VPS4B-207ENST00000591519 PEMTQ9UBM1 199 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 MTFP1Q9UDX5 166 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 DMRT1Q9Y5R6 373 aa7.88□□□□□ -1.15
VPS4B-207ENST00000591519 CSMD3Q7Z407 3707 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 IZUMO1RA6ND01 250 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 FABP12A6NFH5 140 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 ZNF785A8K8V0 405 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 GABARAPH6UMI1 98 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 BMPR1BO00238 502 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 CREBL2O60519 120 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-207ENST00000591519 ACTL6BO94805 426 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 CD3DP04234 171 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 RLN1P04808 185 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 SAA1P0DJI8 122 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-207ENST00000591519 PGAM2P15259 253 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 GNRHRP30968 328 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 PPP5CP53041 499 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 DEFA5Q01523 94 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 ATP5G2Q06055 141 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 EIF4EBP1Q13541 118 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-207ENST00000591519 KLK9Q2XQG4 91 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 RNASE10Q5GAN6 216 aaKnown RBP7.87□□□□□ -1.15
VPS4B-207ENST00000591519 FAAP20Q6NZ36 180 aa7.87□□□□□ -1.15
VPS4B-207ENST00000591519 DHRS11Q6UWP2 260 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms