RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 GEMIN2O14893 280 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 RAB29O14966 203 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RTL8CO15255 209 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 ZNF780AO75290 641 aaPredicted RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 CA11O75493 328 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 CDRT1O95170 752 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 MT-ND4P03905 459 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RAB3AP20336 220 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RAB3BP20337 219 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 SERPINA2P20848 420 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 S100PP25815 95 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 SDC2P34741 201 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 PPP1CCP36873 323 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 RPS19P39019 145 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 OR3A3P47888 321 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 MFAP2P55001 183 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 NANOS3P60323 173 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 RPS25P62851 125 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 PPP3R1P63098 170 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 GNMTQ14749 295 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 ZNF846Q147U1 533 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 SPANXN2Q5MJ10 180 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 DDI2Q5TDH0 399 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 C22orf42Q6IC83 251 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RBPMS2Q6ZRY4 209 aaKnown RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 NR2C2APQ86WQ0 139 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 FAM223AQ8IWN6 122 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 CENPSQ8N2Z9 138 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 OR4K15Q8NH41 348 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 OR1L1Q8NH94 360 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 TMEM203Q969S6 136 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 MARC2Q969Z3 335 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 PTX4Q96A99 478 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 DERL3Q96Q80 235 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 PHB2Q99623 299 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 SULT4A1Q9BR01 284 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 DCUN1D5Q9BTE7 237 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RIMS4Q9H426 269 aaPredicted RBP4.37□□□□□ -1.71
SMG6-219ENST00000575663 TAF9BQ9HBM6 251 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 IL36GQ9NZH8 169 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 GHRLQ9UBU3 117 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 STEAP1Q9UHE8 339 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 APLNQ9ULZ1 77 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 RNF24Q9Y225 148 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 ETV7Q9Y603 341 aa4.37□□□□□ -1.71
SMG6-219ENST00000575663 A0A0A6YYH2 397 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 A6NJ64 397 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 C16orf90A8MZG2 172 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 LINC00587B1AMM8 73 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 LGALS9O00182 355 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 MPPED1O15442 326 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 NUPL2O15504 423 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 YPEL1O60688 119 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GGCTO75223 188 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 SCGNO76038 276 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 APOA2P02652 100 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 MAS1P04201 325 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 CLEC3BP05452 202 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 FCER2P06734 321 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 UBBP0CG47 229 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 P0DMU3 169 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 FAM231AP0DMU4 169 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 FAM231CP0DMU5 169 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GTF2F2P13984 249 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 RCVRNP35243 200 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 PPP5CP53041 499 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 ATP5IP56385 69 aaPredicted RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 LSM3P62310 102 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 ATP5G2Q06055 141 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GPR176Q14439 515 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 PSG5Q15238 335 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 USF2Q15853 346 aaPredicted RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 LY6G6FQ5SQ64 297 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 HACD4Q5VWC8 232 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GLT8D1Q68CQ7 371 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 OR4A47Q6IF82 309 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 ZNF529Q6P280 563 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GLDNQ6ZMI3 551 aaPredicted RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 Q8N1X5 172 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 ADAD2Q8NCV1 583 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 OR52L2PQ8NGH6 319 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 OR51A2Q8NGJ7 313 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 DEDD2Q8WXF8 326 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 GALMQ96C23 342 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 YPEL2Q96QA6 119 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 RARRES2Q99969 163 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 PDCD1LG2Q9BQ51 273 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 CCDC32Q9BV29 185 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 PARP12Q9H0J9 701 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 IFI27L2Q9H2X8 130 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 TMEM138Q9NPI0 162 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 ZNF581Q9P0T4 197 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 ZNF230Q9UIE0 474 aaPredicted RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 RBMX2Q9Y388 322 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 PUS1Q9Y606 427 aaKnown RBP eCLIP4.36□□□□□ -1.71
SMG6-219ENST00000575663 V9GY05 133 aa4.36□□□□□ -1.71
SMG6-219ENST00000575663 APOBP04114 4563 aaKnown RBP4.36□□□□□ -1.71
SMG6-219ENST00000575663 IGHV4-4A0A075B6R2 117 aa4.35□□□□□ -1.71
SMG6-219ENST00000575663 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms