RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	OR4A47	Q6IF82	309 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	HCP5	Q6MZN7	132 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	SSX9	Q7RTT3	188 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	PDPN	Q86YL7	162 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	VKORC1L1	Q8N0U8	176 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	PNKD	Q8N490	385 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	OR11H6	Q8NGC7	330 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	OSR1	Q8TAX0	266 aa	Predicted RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	SCARB1	Q8WTV0	552 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	PHYHIPL	Q96FC7	376 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	BSCL2	Q96G97	398 aa	Predicted RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	SMIM8	Q96KF7	97 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	SLC25A31	Q9H0C2	315 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	RBKS	Q9H477	322 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	SIRT7	Q9NRC8	400 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	FOXA2	Q9Y261	457 aa	Predicted RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	WASHC3	Q9Y3C0	194 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	WSB1	Q9Y6I7	421 aa		6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	PRKDC	P78527	4128 aa	Known RBP	6.07	□□□□□ -1.44
TPM1-231	ENST00000561395	TET2	Q6N021	2002 aa	Predicted RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	TRAV3	A0A0B4J244	114 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	IGHV4-61	A0A0C4DH41	118 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	RPS10-NUDT3	A0A1W2PQS6	291 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	FAM24A	A6NFZ4	105 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	SRRM4	A7MD48	611 aa	Known RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395		H3BP45	60 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395		H7C2Y5	167 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	SHOX	O15266	292 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	FBXO24	O75426	580 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	RBMXL2	O75526	392 aa	Known RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	PF4	P02776	101 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	IL6R	P08887	468 aa	Predicted RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	IGHV4-31	P0DP07	118 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	DEFA6	Q01524	100 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	NHLH2	Q02577	135 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	KLRD1	Q13241	179 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	FAM120AOS	Q5T036	256 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	RPL7L1	Q6DKI1	246 aa	Known RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	HIST2H2BD	Q6DRA6	164 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	ALKAL2	Q6UX46	152 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	VMO1	Q7Z5L0	202 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	ZNF429	Q86V71	674 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	OR8H3	Q8N146	312 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	TMEM252	Q8N6L7	170 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	OR52E5	Q8NH55	327 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	OR4A16	Q8NH70	328 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	DTD1	Q8TEA8	209 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	C1orf159	Q96HA4	380 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	HARBI1	Q96MB7	349 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	JMJD8	Q96S16	334 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	AIFM2	Q9BRQ8	373 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	QTRT1	Q9BXR0	403 aa	Known RBP	6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	SIRPD	Q9H106	197 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	WFDC1	Q9HC57	220 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	MMP26	Q9NRE1	261 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	TMEM14B	Q9NUH8	114 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	PSENEN	Q9NZ42	101 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	CACFD1	Q9UGQ2	172 aa		6.06	□□□□□ -1.44
TPM1-231	ENST00000561395	IGHV1-3	A0A0C4DH29	117 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395		A0A1W2PPI3	338 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	FAM157A	C9JC47	383 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	RNASEK-C17orf49	H0YIS7	233 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	UPK2	O00526	184 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	JTB	O76095	146 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	ARG1	P05089	322 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	SAA1	P0DJI8	122 aa	Predicted RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	HTR1D	P28221	377 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	MC5R	P33032	325 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	SULT1A1	P50225	295 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	DYNLT3	P51808	116 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	DVL1P1	P54792	670 aa	Predicted RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	SPCS3	P61009	180 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	EIF5A	P63241	154 aa	Known RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	TMEM267	Q0VDI3	215 aa	Predicted RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	CLLU1	Q5K131	121 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	LDLRAD2	Q5SZI1	272 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	TPTE2P1	Q5T6R2	138 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	TMEM14EP	Q6UXP3	125 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	STX12	Q86Y82	276 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	BAP18	Q8IXM2	172 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	PUSL1	Q8N0Z8	303 aa	Known RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	STPG2	Q8N412	459 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	C3orf56	Q8N813	242 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	UBAC2	Q8NBM4	344 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	OR4C13	Q8NGP0	309 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	LHX4	Q969G2	390 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	RPE	Q96AT9	228 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	FLYWCH2	Q96CP2	140 aa	Known RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	ANAPC16	Q96DE5	110 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	RBMXL1	Q96E39	390 aa	Known RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	CIB3	Q96Q77	187 aa	Predicted RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	OR4C12	Q96R67	309 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	TBX15	Q96SF7	602 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	SMIM3	Q9BZL3	60 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	ARV1	Q9H2C2	271 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	BET1L	Q9NYM9	111 aa		6.05	□□□□□ -1.44
TPM1-231	ENST00000561395	NUP50	Q9UKX7	468 aa		6.05	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms