RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 PRCDQ00LT1 54 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 CLEC12BQ2HXU8 276 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 RPL7L1Q6DKI1 246 aaKnown RBP10.17□□□□□ -0.78
CACNB3-217ENST00000550483 ALKAL2Q6UX46 152 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 SPNS3Q6ZMD2 512 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 PDZD9Q8IXQ8 264 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 OR5C1Q8NGR4 320 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 C1orf159Q96HA4 380 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 GINS3Q9BRX5 216 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 GGACTQ9BVM4 153 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 COMMD5Q9GZQ3 224 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 MED9Q9NWA0 146 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 ZNRD1Q9P1U0 126 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 TCF19Q9Y242 345 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 OR51B2Q9Y5P1 312 aa10.17□□□□□ -0.78
CACNB3-217ENST00000550483 LINC00862A6NCI5 91 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 B4DSR2 109 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 KCNAB3O43448 404 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 NXPH3O95157 252 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 HOXA1P49639 335 aaPredicted RBP10.16□□□□□ -0.78
CACNB3-217ENST00000550483 OR2B8PP59922 312 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 RAB11AP62491 216 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 RPL8P62917 257 aaKnown RBP10.16□□□□□ -0.78
CACNB3-217ENST00000550483 NHLH2Q02577 135 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 PAX8Q06710 450 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 SPANXN5Q5MJ07 72 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 HCP5Q6MZN7 132 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 PRSS57Q6UWY2 283 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 HSD17B13Q7Z5P4 300 aaPredicted RBP10.16□□□□□ -0.78
CACNB3-217ENST00000550483 MOB3BQ86TA1 216 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 MMD2Q8IY49 270 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 OR10P1Q8NGE3 313 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 OR1L8Q8NGR8 309 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 MALSU1Q96EH3 234 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 PLEKHA3Q9HB20 300 aa10.16□□□□□ -0.78
CACNB3-217ENST00000550483 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 IGHV4-61A0A0C4DH41 118 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 A0A1W2PPI3 338 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 RPS10-NUDT3A0A1W2PQS6 291 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 NUDT19A8MXV4 375 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 UMAD1C9J7I0 102 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 OR8U8P0C7N1 319 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 VDAC2P45880 294 aaPredicted RBP10.15□□□□□ -0.78
CACNB3-217ENST00000550483 DYNLT3P51808 116 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 F2RL1P55085 397 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 DEFB113Q30KQ7 82 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 VKORC1L1Q8N0U8 176 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 LILRB2Q8N423 598 aa10.15□□□□□ -0.78
CACNB3-217ENST00000550483 SAT2Q96F10 170 aaPredicted RBP10.15□□□□□ -0.78
CACNB3-217ENST00000550483 HEYLQ9NQ87 328 aaPredicted RBP10.15□□□□□ -0.78
CACNB3-217ENST00000550483 MALRD1Q5VYJ5 2156 aa10.15□□□□□ -0.79
CACNB3-217ENST00000550483 NBEAL1Q6ZS30 2694 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 IGHV4-30-2A0A087WSY4 118 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SRRM4A7MD48 611 aaKnown RBP10.14□□□□□ -0.79
CACNB3-217ENST00000550483 FNDC10F2Z333 226 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 RNASEK-C17orf49H0YIS7 233 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 TRIM77I1YAP6 450 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 CST7O76096 145 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 IGLV2-23P01705 113 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 MSMBP08118 114 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SPP1P10451 314 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 S100A1P23297 94 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 BRS3P32247 399 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 BLOC1S1P78537 153 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 DIAPH2-AS1Q14236 149 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SLC25A24Q6NUK1 477 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SCGB1C1Q8TD33 95 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SRSF8Q9BRL6 282 aaKnown RBP10.14□□□□□ -0.79
CACNB3-217ENST00000550483 TMEM147Q9BVK8 224 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 SMIM3Q9BZL3 60 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 PFDN2Q9UHV9 154 aa10.14□□□□□ -0.79
CACNB3-217ENST00000550483 FAM157AC9JC47 383 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 H3BP45 60 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 J3QLI3 93 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 FGF16O43320 207 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 ATP6V1G1O75348 118 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 ACTL6BO94805 426 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 VENTXO95231 258 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 MOSP00540 346 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 IFNA10P01566 189 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 NMBP08949 121 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 METTL15P1P0C7V9 234 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 COMPP49747 757 aaPredicted RBP10.13□□□□□ -0.79
CACNB3-217ENST00000550483 SULT1A2P50226 295 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 SUB1P53999 127 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNB3-217ENST00000550483 ERHP84090 104 aaKnown RBP10.13□□□□□ -0.79
CACNB3-217ENST00000550483 LOXL1Q08397 574 aaPredicted RBP10.13□□□□□ -0.79
CACNB3-217ENST00000550483 SLC38A11Q08AI6 406 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 CLINT1Q14677 625 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 DPPA3Q6W0C5 159 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 THNSL2Q86YJ6 484 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 TMEM217Q8N7C4 229 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 SLC24A4Q8NFF2 622 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 OR2T10Q8NGZ9 312 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 TBX15Q96SF7 602 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 PSMG3Q9BT73 122 aaPredicted RBP10.13□□□□□ -0.79
CACNB3-217ENST00000550483 MMP26Q9NRE1 261 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 KIAA1456Q9P272 454 aa10.13□□□□□ -0.79
CACNB3-217ENST00000550483 TRAV3A0A0B4J244 114 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms