RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CLCC1Q96S66 551 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 PHB2Q99623 299 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 OR51J1Q9H342 316 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 GPN1Q9HCN4 374 aaPredicted RBP10.33□□□□□ -0.76
DDX11-227ENST00000544652 SERTAD4Q9NUC0 356 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 TMED3Q9Y3Q3 217 aa10.33□□□□□ -0.76
DDX11-227ENST00000544652 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 IGF1P05019 195 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 HLA-GP17693 338 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 COMPP49747 757 aaPredicted RBP10.32□□□□□ -0.76
DDX11-227ENST00000544652 RPL8P62917 257 aaKnown RBP10.32□□□□□ -0.76
DDX11-227ENST00000544652 NDPQ00604 133 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 KRTAP24-1Q3LI83 254 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 AARDQ4LEZ3 155 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 Q6ZRM9 215 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 REC114Q7Z4M0 266 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 SLC35E3Q7Z769 313 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 ZNF429Q86V71 674 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 FOXRED2Q8IWF2 684 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 OR2T6Q8NHC8 308 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 LINC01006Q8NI28 216 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 TAF15Q92804 592 aaKnown RBP eCLIP10.32□□□□□ -0.76
DDX11-227ENST00000544652 GPR146Q96CH1 333 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 TMEM14BQ9NUH8 114 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 COA4Q9NYJ1 87 aa10.32□□□□□ -0.76
DDX11-227ENST00000544652 FOXA2Q9Y261 457 aaPredicted RBP10.32□□□□□ -0.76
DDX11-227ENST00000544652 TMEM89A2RUT3 159 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 CGB1A6NKQ9 187 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 ATP6V0E1O15342 81 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 SNAPC5O75971 98 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 EGR2P11161 476 aaPredicted RBP10.31□□□□□ -0.76
DDX11-227ENST00000544652 SLC25A6P12236 298 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 RIPPLY3P57055 190 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 FXYD3Q14802 87 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 TNXAQ16473 311 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 TATDN3Q17R31 274 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 IZUMO4Q1ZYL8 232 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 C9orf152Q5JTZ5 239 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 C12orf45Q8N5I9 185 aaPredicted RBP10.31□□□□□ -0.76
DDX11-227ENST00000544652 OR4F5Q8NH21 305 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 SGMS2Q8NHU3 365 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 SRSF12Q8WXF0 261 aaKnown RBP10.31□□□□□ -0.76
DDX11-227ENST00000544652 ARPC1AQ92747 370 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 WNT10AQ9GZT5 417 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 FKBP11Q9NYL4 201 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 PRNDQ9UKY0 176 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 ZNF257Q9Y2Q1 563 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 FBXO7Q9Y3I1 522 aa10.31□□□□□ -0.76
DDX11-227ENST00000544652 NIPBLQ6KC79 2804 aaeCLIP10.31□□□□□ -0.76
DDX11-227ENST00000544652 A0A1B0GU03 582 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 A0A1B0GW64 132 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 E7EUB6 86 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 AP4M1O00189 453 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 PITX3O75364 302 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 ADAP1O75689 374 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 TMEM95Q3KNT9 176 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 GGNBP1Q5YKI7 109 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 OR5B3Q8NH48 314 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 OR4A16Q8NH70 328 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 RNASE11Q8TAA1 199 aaKnown RBP10.3□□□□□ -0.76
DDX11-227ENST00000544652 NSG2Q9Y328 171 aa10.3□□□□□ -0.76
DDX11-227ENST00000544652 TEX50A0A1B0GTY4 177 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 A0A1B0GUS0 222 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 CLPSL1A2RUU4 121 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 ACTL6BO94805 426 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 CNIH1O95406 144 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 HOXB5P09067 269 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 SULT1A3P0DMM9 295 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 SULT1A4P0DMN0 295 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 MYOD1P15172 320 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 VDAC2P45880 294 aaPredicted RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 RPL27AP46776 148 aaKnown RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 OR2B8PP59922 312 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 GNB1P62873 340 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 CFHR3Q02985 330 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 FOXL1Q12952 345 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 SMCO1Q147U7 214 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 PDLIM3Q53GG5 364 aaPredicted RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 AKIRIN2Q53H80 203 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 C10orf55Q5SWW7 151 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 THOC7Q6I9Y2 204 aaKnown RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 STPG2Q8N412 459 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 OR52E5Q8NH55 327 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 WIPF2Q8TF74 440 aaPredicted RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 TMEM68Q96MH6 324 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 COMMD5Q9GZQ3 224 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 NDUFA4L2Q9NRX3 87 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.29□□□□□ -0.76
DDX11-227ENST00000544652 CACNG5Q9UF02 275 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 OR51B2Q9Y5P1 312 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 ALG5Q9Y673 324 aa10.29□□□□□ -0.76
DDX11-227ENST00000544652 MSGN1A6NI15 193 aa10.28□□□□□ -0.76
DDX11-227ENST00000544652 MPTX1A8MV57 137 aa10.28□□□□□ -0.76
DDX11-227ENST00000544652 TEX22C9J3V5 150 aa10.28□□□□□ -0.76
DDX11-227ENST00000544652 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
DDX11-227ENST00000544652 IFNA21P01568 189 aa10.28□□□□□ -0.76
DDX11-227ENST00000544652 MDKP21741 143 aaPredicted RBP10.28□□□□□ -0.76
DDX11-227ENST00000544652 PPIFP30405 207 aaKnown RBP10.28□□□□□ -0.76
DDX11-227ENST00000544652 PROK1P58294 105 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms