RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 TMEM186Q96B77 213 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 TCEAL7Q9BRU2 100 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 GGACTQ9BVM4 153 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 HINT2Q9BX68 163 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 TUBA4BQ9H853 241 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 WDR83OSQ9Y284 106 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 ZFP92A6NM28 416 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 UPK2O00526 184 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 UBE2CO00762 179 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 IGKV1D-33P01593 117 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 IGKV1-33P01594 117 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 SNRNP70P08621 437 aaKnown RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 REG1BP48304 166 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 RPP25LQ8N5L8 163 aaKnown RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 SLC24A4Q8NFF2 622 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 OR10G4Q8NGN3 311 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 OR10G9Q8NGN4 311 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 OR10G7Q8NGN6 311 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
PTPRO-209ENST00000543886 RALYQ9UKM9 306 aaKnown RBP13.92□□□□□ -0.18
PTPRO-209ENST00000543886 RELNP78509 3460 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 C5orf52A6NGY3 159 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 H0YJW9 148 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 FSTL3O95633 263 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 IFNA1P01562 189 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 IGHV1-8P0DP01 117 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 BCL2P10415 239 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 NPY1RP25929 384 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 OR9G1Q8NH87 305 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 LHX4Q969G2 390 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 HARBI1Q96MB7 349 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 C20orf24Q9BUV8 137 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 RAB1BQ9H0U4 201 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 ZNF257Q9Y2Q1 563 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 A0A087X0M5 115 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 CTXND1A0A1B0GTU2 59 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 A0A1B0GX30 115 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 C7orf77A4D0Y5 90 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 SRRM4A7MD48 611 aaKnown RBP13.91□□□□□ -0.18
PTPRO-209ENST00000543886 MPDU1O75352 247 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 IGHV2-70P01814 119 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 DLK1P80370 383 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 CYB561D1Q8N8Q1 229 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 ACTR3CQ9C0K3 210 aaPredicted RBP13.91□□□□□ -0.18
PTPRO-209ENST00000543886 SLC25A22Q9H936 323 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 PLEKHA3Q9HB20 300 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 FKBP11Q9NYL4 201 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 BET1LQ9NYM9 111 aa13.91□□□□□ -0.18
PTPRO-209ENST00000543886 PUS1Q9Y606 427 aaKnown RBP eCLIP13.91□□□□□ -0.18
PTPRO-209ENST00000543886 KBTBD11O94819 623 aa13.9□□□□□ -0.18
PTPRO-209ENST00000543886 IL6RP08887 468 aaPredicted RBP13.9□□□□□ -0.18
PTPRO-209ENST00000543886 SAA1P0DJI8 122 aaPredicted RBP13.9□□□□□ -0.18
PTPRO-209ENST00000543886 AKR1C3P42330 323 aa13.9□□□□□ -0.18
PTPRO-209ENST00000543886 RHEBQ15382 184 aa13.9□□□□□ -0.18
PTPRO-209ENST00000543886 FLYWCH2Q96CP2 140 aaKnown RBP13.9□□□□□ -0.18
PTPRO-209ENST00000543886 ITPR1Q14643 2758 aa13.9□□□□□ -0.18
PTPRO-209ENST00000543886 PRSS46E5RG02 174 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 FBP1P09467 338 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 MYOD1P15172 320 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 IL3RAP26951 378 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 PRCDQ00LT1 54 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 ACOT6Q3I5F7 207 aaPredicted RBP13.89□□□□□ -0.19
PTPRO-209ENST00000543886 TMEM170AQ8WVE7 144 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 TMEM133Q9H2Q1 129 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 CBLN4Q9NTU7 201 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 NBASA2RRP1 2371 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 A0A1W2PPH5 198 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 SOX15O60248 233 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 AGAP20933 346 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 TMEM177Q53S58 311 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 PDPNQ86YL7 162 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 NABP2Q9BQ15 211 aa13.89□□□□□ -0.19
PTPRO-209ENST00000543886 CA2P00918 260 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 OPN1MWP04001 364 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 OPN1MW2P0DN77 364 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 OPN1MW3P0DN78 364 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 ZNF137PP52743 207 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 TREML4Q6UXN2 200 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 TGIF2LXQ8IUE1 241 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 OR4C13Q8NGP0 309 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 OR5B3Q8NH48 314 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 NANPQ8TBE9 248 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 METTL1Q9UBP6 276 aaKnown RBP13.88□□□□□ -0.19
PTPRO-209ENST00000543886 VAX2Q9UIW0 290 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 WASHC3Q9Y3C0 194 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 ANKHD1Q8IWZ3 2542 aaKnown RBP13.88□□□□□ -0.19
PTPRO-209ENST00000543886 KALRNO60229 2985 aa13.88□□□□□ -0.19
PTPRO-209ENST00000543886 SMG1Q96Q15 3661 aaKnown RBP13.88□□□□□ -0.19
PTPRO-209ENST00000543886 H3BQ15 152 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 CYB5BO43169 146 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 RBMS3Q6XE24 437 aaKnown RBP13.87□□□□□ -0.19
PTPRO-209ENST00000543886 OR8B3Q8NGG8 313 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 ST6GALNAC6Q969X2 333 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 OR8B2Q96RD0 313 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 PCGF1Q9BSM1 259 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 TEX50A0A1B0GTY4 177 aa13.87□□□□□ -0.19
PTPRO-209ENST00000543886 HMGB3O15347 200 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms