RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 RAB4AP20338 218 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 RAB5AP20339 215 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 PSMB6P28072 239 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 GPX4P36969 197 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 IDH2P48735 452 aaKnown RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 ERFP50548 548 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 CAV3P56539 151 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 VSNL1P62760 191 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 REG3AQ06141 175 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 SGCAQ16586 387 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 GUCA2BQ16661 112 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 RSPO1Q2MKA7 263 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 LDLRAD2Q5SZI1 272 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 UBE2UQ5VVX9 321 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 CNIH2Q6PI25 160 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 PP632Q6XCG6 107 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 SSX6Q7RTT6 188 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC16A13Q7RTY0 426 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 CYP4Z1Q86W10 505 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 NKAIN4Q8IVV8 208 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 C5orf56Q8N8D9 126 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 HSD17B11Q8NBQ5 300 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 NECAP1Q8NC96 275 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 CCDC54Q8NEL0 328 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 BAALCQ8WXS3 180 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 CDS1Q92903 461 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM54Q969K7 222 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 EEF1AKMT3Q96AZ1 226 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 STACQ99469 402 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 HDHD3Q9BSH5 251 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 REEP1Q9H902 201 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM100Q9NV29 134 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 USE1Q9NZ43 259 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF443Q9Y2A4 671 aaPredicted RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 SLC35A3Q9Y2D2 325 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 ACOT9Q9Y305 439 aa2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 NOP16Q9Y3C1 178 aaKnown RBP2.15□□□□□ -2.07
TOPBP1-208ENST00000511439 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 DEFB131BA0A096LNP1 70 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A096LPI6 279 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 IGKV1D-13A0A0B4J2D9 117 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 GNG14A0A1W2PPG7 69 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 ANKRD20A5PA0PJZ0 165 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM213A2RRL7 107 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 IZUMO1RA6ND01 250 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 IQCF6A8MYZ5 107 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 H7C2Y5 167 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 ITGB1BP1O14713 200 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 SNAI2O43623 268 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 HPRT1P00492 218 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 IGLV2-23P01705 113 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 BGLAPP02818 100 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 HLA-DPB1P04440 258 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 LGALS1P09382 135 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TFPTP0C1Z6 253 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 PGA4P0DJD7 388 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 PGA3P0DJD8 388 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 IGKV1-13P0DP09 117 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 CXCR1P25024 350 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 HLA-DMBP28068 263 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 FUSP35637 526 aaKnown RBP eCLIP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TGM4P49221 684 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 RORCP51449 518 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 PLTPP55058 493 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 FGF8P55075 233 aaPredicted RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 DSTNP60981 165 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TSPAN5P62079 268 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 NAB1Q13506 487 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 AQP6Q13520 282 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 APOFQ13790 326 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 OR4D1Q15615 310 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TNXAQ16473 311 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM183BQ1AE95 376 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 C1orf140Q5VVS0 124 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 OR2T2Q6IF00 324 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 NANOGP8Q6NSW7 305 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 WDR86Q86TI4 376 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TMEM183AQ8IXX5 376 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 SELENOHQ8IZQ5 122 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 LRRC18Q8N456 261 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 OR11H6Q8NGC7 330 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 MFSD8Q8NHS3 518 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 ANP32BQ92688 251 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 RPEQ96AT9 228 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 TSNAXQ99598 290 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 CIB1Q99828 191 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 ZNF251Q9BRH9 671 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 AGMATQ9BSE5 352 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 EMC6Q9BV81 110 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 MRM2Q9UI43 246 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 PUS1Q9Y606 427 aaKnown RBP eCLIP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 F11RQ9Y624 299 aaKnown RBP2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 KCNE3Q9Y6H6 103 aa2.14□□□□□ -2.07
TOPBP1-208ENST00000511439 NEBP20929 6669 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A087X0T9 212 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A096LNJ9 63 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 A0A0A6YYH2 397 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 LOC102725191A0A1B0GVB3 256 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 A6NJ64 397 aa2.13□□□□□ -2.07
TOPBP1-208ENST00000511439 TOR1AO14656 332 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms