RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 PLEKHA2Q9HB19 425 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 EHFQ9NZC4 300 aa9.09□□□□□ -0.95
MED28-203ENST00000503945 BIRC6Q9NR09 4857 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 ZNF320A2RRD8 509 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 PPP5D1E7EU14 171 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 UPK2O00526 184 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 NDUFB8O95169 186 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 PMP2P02689 132 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 CLEC3BP05452 202 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 AREGP15514 252 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 TGFBR1P36897 503 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 TAS2R46P59540 309 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 CLEC19AQ6UXS0 136 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 TMEM17Q86X19 198 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 OR5H2Q8NGV7 314 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 OR51H1Q8NH63 302 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 EEF1AKMT3Q96AZ1 226 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 ZNF2Q9BSG1 426 aaPredicted RBP9.08□□□□□ -0.96
MED28-203ENST00000503945 THYN1Q9P016 225 aa9.08□□□□□ -0.96
MED28-203ENST00000503945 TRBV7-1A0A0A6YYK4 115 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 LGALS9O00182 355 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 CYB5BO43169 146 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 PGLYRP1O75594 196 aaPredicted RBP9.07□□□□□ -0.96
MED28-203ENST00000503945 IGHV3-23P01764 117 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 LYL1P12980 280 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 FOLR2P14207 255 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 CTRB1P17538 263 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 ARL3P36405 182 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 TAS2R20P59543 309 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 OR2B8PP59922 312 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 ERVK-16P61578 105 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 TSPAN5P62079 268 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 POU2AF1Q16633 256 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 DEFB114Q30KQ6 69 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 CTRB2Q6GPI1 263 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 LPCAT3Q6P1A2 487 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 LYSMD2Q8IV50 215 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 DYNLRB2Q8TF09 96 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 SLC25A46Q96AG3 418 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 CXorf58Q96LI9 332 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 CMTM3Q96MX0 182 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 SLC2A8Q9NY64 477 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 TECRQ9NZ01 308 aaKnown RBP9.07□□□□□ -0.96
MED28-203ENST00000503945 COMMD3Q9UBI1 195 aa9.07□□□□□ -0.96
MED28-203ENST00000503945 A0A1B0GW64 132 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 IZUMO1RA6ND01 250 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 HLA-AP01891 365 aaKnown RBP9.06□□□□□ -0.96
MED28-203ENST00000503945 IFNA6P05013 189 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 REG1AP05451 166 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 TRAPPC2P0DI81 140 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 TRAPPC2BP0DI82 140 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 MYOD1P15172 320 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 NAT1P18440 290 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 CBLN1P23435 193 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 F2RP25116 425 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 HLA-DMAP28067 261 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 S100GP29377 79 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 LPAR6P43657 344 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 KLK9Q2XQG4 91 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 CD300EQ496F6 205 aaPredicted RBP9.06□□□□□ -0.96
MED28-203ENST00000503945 MOB3AQ96BX8 217 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 DGCR14Q96DF8 476 aaKnown RBP9.06□□□□□ -0.96
MED28-203ENST00000503945 SRSF8Q9BRL6 282 aaKnown RBP9.06□□□□□ -0.96
MED28-203ENST00000503945 TM2D3Q9BRN9 247 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 TMEM140Q9NV12 185 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 KLK9Q9UKQ9 250 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 S4R3C0 116 aa9.06□□□□□ -0.96
MED28-203ENST00000503945 TRAV3A0A0B4J244 114 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 LCE6AA0A183 80 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 TEX50A0A1B0GTY4 177 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 C2orf70A6NJV1 201 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 ZNF785A8K8V0 405 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 SNAPC5O75971 98 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 TPPPO94811 219 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 KRASP01116 189 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 APOA1P02647 267 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 FGF2P09038 288 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 RPA2P15927 270 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 RORCP51449 518 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 GUCA2BQ16661 112 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 HAGHQ16775 308 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 C19orf35Q6ZS72 473 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 HSD17B13Q7Z5P4 300 aaPredicted RBP9.05□□□□□ -0.96
MED28-203ENST00000503945 LAX1Q8IWV1 398 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 CITED4Q96RK1 184 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 SPATA25Q9BR10 227 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 THAP7Q9BT49 309 aaPredicted RBP9.05□□□□□ -0.96
MED28-203ENST00000503945 FUNDC2Q9BWH2 189 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 QTRT1Q9BXR0 403 aaKnown RBP9.05□□□□□ -0.96
MED28-203ENST00000503945 PALMDQ9NP74 551 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 COMMD9Q9P000 198 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 CSMD3Q7Z407 3707 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 HYDINQ4G0P3 5121 aa9.05□□□□□ -0.96
MED28-203ENST00000503945 TNCP24821 2201 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 STARD9Q9P2P6 4700 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 IGLV11-55A0A075B6I3 123 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 GPR31O00270 319 aa9.04□□□□□ -0.96
MED28-203ENST00000503945 S1PR2O95136 353 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms