RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 SPACA5Q96QH8 159 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 SDF2Q99470 211 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 HIST1H4GQ99525 98 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 THTPAQ9BU02 230 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 C19orf24Q9BVV8 132 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 MRPL20Q9BYC9 149 aaKnown RBP3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 POLR2J3Q9H1A7 115 aaKnown RBP3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 TUBA4BQ9H853 241 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 CBLN4Q9NTU7 201 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 ZNF586Q9NXT0 402 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 CCDC167Q9P0B6 97 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 XCL2Q9UBD3 114 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 AMMECR1Q9Y4X0 333 aaPredicted RBP3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 BAZ1AQ9NRL2 1556 aaPredicted RBP3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 CCDC88BA6NC98 1476 aa3.66□□□□□ -1.82
CTNNB1-215ENST00000488914 HECW2Q9P2P5 1572 aa3.65□□□□□ -1.82
CTNNB1-215ENST00000488914 PLCH2O75038 1416 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 A0A1W2PRS3 328 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 IZUMO1RA6ND01 250 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 F5H5P2 479 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 G3V3Q6 166 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 PDCD5O14737 125 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 FFAR1O14842 300 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 PSPHP1O15172 72 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 PGLYRP1O75594 196 aaPredicted RBP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 KRASP01116 189 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 APOC3P02656 99 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 SPINK8P0C7L1 97 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 PSMB8P28062 276 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 OR10J1P30954 320 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 KLK7P49862 253 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 TIMM10P62072 90 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 RPS11P62280 158 aaKnown RBP eCLIP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 FKBP1AP62942 108 aaKnown RBP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ERCC8Q13216 396 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ZNF146Q15072 292 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 MLF2Q15773 248 aaPredicted RBP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 CST6Q15828 149 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 RTL8BQ17RB0 113 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 IQCJQ1A5X6 159 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 VMA21Q3ZAQ7 101 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 TMEM236Q5W0B7 351 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 KDM4DQ6B0I6 523 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ACP7Q6ZNF0 438 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 PRR15Q8IV56 129 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 RNF175Q8N4F7 328 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 TEX29Q8N6K0 151 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ZIC4Q8N9L1 334 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ZNRF1Q8ND25 227 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 OR5D14Q8NGL3 314 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 OR2T27Q8NH04 317 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 CHCHD10Q8WYQ3 142 aaPredicted RBP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 FAM3DQ96BQ1 224 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 FAM218AQ96MZ4 157 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ADAT1Q9BUB4 502 aaKnown RBP3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 BET1LQ9NYM9 111 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 LINC00527Q9UJ94 153 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ANAPC10Q9UM13 185 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 MPC1Q9Y5U8 109 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 ENPP4Q9Y6X5 453 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 MYOM2P54296 1465 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 SMCHD1A6NHR9 2005 aa3.65□□□□□ -1.83
CTNNB1-215ENST00000488914 IGHV1-69-2A0A0G2JMI3 117 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 COLCA2A8K830 154 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 KLLNB2CW77 178 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 CCDC179H3BU77 68 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 GABARAPH6UMI1 98 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 J3QRK9 145 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 EDF1O60869 148 aaKnown RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 LYZL6O75951 148 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 SMIM10L2AP0DMW4 78 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 SMIM10L2BP0DMW5 78 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 CRYGSP22914 178 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 CD70P32970 193 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 ZNF93P35789 620 aaPredicted RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 DIO3P55073 304 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 ABCA11PQ4W5N1 156 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 LCN15Q6UWW0 184 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 ZNF705AQ6ZN79 300 aaPredicted RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 CLEC20AQ6ZU45 233 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 ZNF491Q8N8L2 437 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 OR11H7Q8NGC8 314 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 RPS4Y2Q8TD47 263 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 LMX1AQ8TE12 382 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 RTN4IP1Q8WWV3 396 aaPredicted RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 GNPNAT1Q96EK6 184 aaPredicted RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 BORCS8Q96FH0 119 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 LINC01587Q99440 93 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 NAA38Q9BRA0 125 aaKnown RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 RNF126Q9BV68 326 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 SNRNP25Q9BV90 132 aaKnown RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 DPY30Q9C005 99 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 AICDAQ9GZX7 198 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 SMCO4Q9NRQ5 59 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 NUFIP1Q9UHK0 495 aaKnown RBP3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 PHLPP1O60346 1717 aa3.64□□□□□ -1.83
CTNNB1-215ENST00000488914 CASZ1Q86V15 1759 aa3.63□□□□□ -1.83
CTNNB1-215ENST00000488914 IGHV3OR16-12A0A075B7B8 117 aa3.63□□□□□ -1.83
CTNNB1-215ENST00000488914 A0A087X0T9 212 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms