RNA–Protein interactions for RNA: ENST00000488912.5

COL21A1-211, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 2,327 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-211ENST00000488912 PRSS54Q6PEW0 395 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 FAM71E2Q8N5Q1 922 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 OR5AN1Q8NGI8 311 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 MBD6Q96DN6 1003 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 AMMECR1Q9Y4X0 333 aaPredicted RBP8.85□□□□□ -0.99
COL21A1-211ENST00000488912 INSIG2Q9Y5U4 225 aa8.85□□□□□ -0.99
COL21A1-211ENST00000488912 HECTD1Q9ULT8 2610 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 A0A1W2PRD5 423 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 A0A1W2PRF3 423 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 A0A1W2PRM7 423 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 LY6LH3BQJ8 138 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 DEDDO75618 318 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 PET100P0DJ07 73 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 SLC25A6P12236 298 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 NKX2-1P43699 371 aaPredicted RBP8.84□□□□□ -0.99
COL21A1-211ENST00000488912 AKR1C1Q04828 323 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 H2BFWTQ7Z2G1 175 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 DCUN1D4Q92564 292 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 HIST1H2BAQ96A08 127 aa8.84□□□□□ -0.99
COL21A1-211ENST00000488912 RCL1Q9Y2P8 373 aaKnown RBP8.84□□□□□ -0.99
COL21A1-211ENST00000488912 TET2Q6N021 2002 aaPredicted RBP8.84□□□□□ -0.99
COL21A1-211ENST00000488912 KANTRA0A1W2PQU2 76 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 ST8SIA3O43173 380 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 LY86O95711 162 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 APOA2P02652 100 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 LYL1P12980 280 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 NQO2P16083 231 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 HTR1DP28221 377 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 SRSF3P84103 164 aaKnown RBP8.83□□□□□ -1
COL21A1-211ENST00000488912 MIDNQ504T8 468 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 LHFPL4Q7Z7J7 247 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 KRTAP1-3Q8IUG1 177 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 RPEQ96AT9 228 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 MAGT1Q9H0U3 335 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 POMT1Q9Y6A1 747 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 PDZD2O15018 2839 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 TNCP24821 2201 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 IGHV3-72A0A0B4J1Y9 119 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 AP4M1O00189 453 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 MT-ND4LP03901 98 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 MSMBP08118 114 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 PAX8Q06710 450 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 SSX3Q99909 188 aa8.83□□□□□ -1
COL21A1-211ENST00000488912 IGHV1-3A0A0C4DH29 117 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 OR9G9P0C7N8 305 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 PPT1P50897 306 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 ERVK-16P61578 105 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 ID3Q02535 119 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 TPTE2P1Q5T6R2 138 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 MAPK1IP1LQ8NDC0 245 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 LHX4Q969G2 390 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 MALSU1Q96EH3 234 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 RHOVQ96L33 236 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 ZNF471Q9BX82 626 aaPredicted RBP8.82□□□□□ -1
COL21A1-211ENST00000488912 TUBA4BQ9H853 241 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 TMEM140Q9NV12 185 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 DPM3Q9P2X0 92 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 NSG2Q9Y328 171 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 HILPDAQ9Y5L2 63 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 ZANQ9Y493 2812 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 CCDC168Q8NDH2 2452 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 PRRC2AP48634 2157 aaKnown RBP8.82□□□□□ -1
COL21A1-211ENST00000488912 A0A1W2PPI3 338 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 MSGN1A6NI15 193 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 SRRM4A7MD48 611 aaKnown RBP8.82□□□□□ -1
COL21A1-211ENST00000488912 B4DSR2 109 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 RNF223E7ERA6 249 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 SSSCA1O60232 199 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 GAPDHP04406 335 aaKnown RBP8.82□□□□□ -1
COL21A1-211ENST00000488912 RAB5CP51148 216 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 OR4A47Q6IF82 309 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 ACOT7LQ6ZUV0 252 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 PDPNQ86YL7 162 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 HARBI1Q96MB7 349 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 PRDM13Q9H4Q3 707 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 UQCC1Q9NVA1 299 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 WASHC3Q9Y3C0 194 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 CREBBPQ92793 2442 aa8.82□□□□□ -1
COL21A1-211ENST00000488912 HRASP01112 189 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 OR2B8PP59922 312 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 CD81P60033 236 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 IL34Q6ZMJ4 242 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 MOB3BQ86TA1 216 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 INO80EQ8NBZ0 244 aaPredicted RBP8.81□□□□□ -1
COL21A1-211ENST00000488912 FLYWCH2Q96CP2 140 aaKnown RBP8.81□□□□□ -1
COL21A1-211ENST00000488912 Q96MF0 132 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 TRAV3A0A0B4J244 114 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 RBMXL2O75526 392 aaKnown RBP8.81□□□□□ -1
COL21A1-211ENST00000488912 MC5RP33032 325 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 CEACAM3P40198 252 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 UBE2E1P51965 193 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 LOXL1Q08397 574 aaPredicted RBP8.81□□□□□ -1
COL21A1-211ENST00000488912 POU2AF1Q16633 256 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 TMEM177Q53S58 311 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 PRSS57Q6UWY2 283 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 OR4C13Q8NGP0 309 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 OSR1Q8TAX0 266 aaPredicted RBP8.81□□□□□ -1
COL21A1-211ENST00000488912 C1orf159Q96HA4 380 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 C11orf1Q9H5F2 150 aa8.81□□□□□ -1
COL21A1-211ENST00000488912 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms