RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ERVFRD-1P60508 538 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 TMEM249Q2WGJ8 235 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 C11orf42Q8N5U0 333 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 LY6G5BQ8NDX9 201 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 ITLN2Q8WWU7 325 aaPredicted RBP17.72■□□□□ 0.43
CCM2-206ENST00000474617 CLEC7AQ9BXN2 247 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 NPVFQ9HCQ7 196 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 RFNGQ9Y644 331 aa17.72■□□□□ 0.43
CCM2-206ENST00000474617 DIDO1Q9BTC0 2240 aaKnown RBP17.71■□□□□ 0.43
CCM2-206ENST00000474617 PPIAL4CA0A0B4J2A2 164 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 SAA1P0DJI8 122 aaPredicted RBP17.71■□□□□ 0.43
CCM2-206ENST00000474617 PPIAL4GP0DN37 164 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 OPRK1P41145 380 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 RHEBQ15382 184 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 VMA21Q3ZAQ7 101 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 SPINK9Q5DT21 86 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 WDR25Q64LD2 544 aaPredicted RBP17.71■□□□□ 0.43
CCM2-206ENST00000474617 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.71■□□□□ 0.43
CCM2-206ENST00000474617 OR1L8Q8NGR8 309 aa17.71■□□□□ 0.43
CCM2-206ENST00000474617 YLPM1P49750 1951 aaKnown RBP17.7■□□□□ 0.42
CCM2-206ENST00000474617 LOC102723971A0A1B0GUV8 181 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 MAP1LC3B2A6NCE7 125 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 PAX6P26367 422 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 RPL8P62917 257 aaKnown RBP17.7■□□□□ 0.42
CCM2-206ENST00000474617 FFAR4Q5NUL3 377 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 COMMD5Q9GZQ3 224 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 MAP1LC3BQ9GZQ8 125 aa17.7■□□□□ 0.42
CCM2-206ENST00000474617 IGHV2-26A0A0B4J1V2 119 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 IGLV1-47P01700 117 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 BCL2P10415 239 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 CCL20P78556 96 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 HLA-DRB5Q30154 266 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 C2orf83Q53S99 150 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 OR10G9Q8NGN4 311 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 OR10G7Q8NGN6 311 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 RNF5Q99942 180 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 SMCO4Q9NRQ5 59 aa17.69■□□□□ 0.42
CCM2-206ENST00000474617 M0R1W7 72 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 RRHO14718 337 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 ELLP55199 621 aaPredicted RBP17.68■□□□□ 0.42
CCM2-206ENST00000474617 ICAM4Q14773 271 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 BSXQ3C1V8 233 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 PATZ1Q9HBE1 687 aaKnown RBP17.68■□□□□ 0.42
CCM2-206ENST00000474617 MANBALQ9NQG1 85 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 VAX2Q9UIW0 290 aa17.68■□□□□ 0.42
CCM2-206ENST00000474617 TEX50A0A1B0GTY4 177 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 SRRM4A7MD48 611 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 SEC14L6B5MCN3 397 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 TSPAN4O14817 238 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 TSPAN9O75954 239 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 SRP19P09132 144 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 RPS16P62249 146 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 ERHP84090 104 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 ZNF726P1Q15940 193 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 C1orf122Q6ZSJ8 110 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 RPP25LQ8N5L8 163 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 TUBA4BQ9H853 241 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 CHD8Q9HCK8 2581 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 ATRXP46100 2492 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 MED19A0JLT2 244 aaPredicted RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 SOD3P08294 240 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 NPBWR1P48145 328 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 ACSM6Q6P461 480 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 TREML4Q6UXN2 200 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 TEX45Q8NA69 505 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 C17orf50Q8WW18 174 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 NDUFA4L2Q9NRX3 87 aa17.67■□□□□ 0.42
CCM2-206ENST00000474617 LSM4Q9Y4Z0 139 aaKnown RBP17.67■□□□□ 0.42
CCM2-206ENST00000474617 A0A1B0GV50 99 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 LYNX1G3V0Z9 82 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 LYNX1P0DP58 116 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 MAS1LP35410 378 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 SUB1P53999 127 aaKnown RBP eCLIP17.66■□□□□ 0.42
CCM2-206ENST00000474617 HAGHQ16775 308 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 TEPPQ6URK8 271 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 LCN15Q6UWW0 184 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 KIR3DL3Q8N743 410 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 CACNG8Q8WXS5 425 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 RARRES2Q99969 163 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 VSIRQ9H7M9 311 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 GNG13Q9P2W3 67 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 ADGRG4Q8IZF6 3080 aa17.66■□□□□ 0.42
CCM2-206ENST00000474617 FAM74A7A6NL05 159 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 BUB1B-PAK6H3BSN5 160 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 CA2P00918 260 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 IGFBP2P18065 325 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 PSMB3P49720 205 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 FAM74A3Q4VXF1 159 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 ZNRD1Q9P1U0 126 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 DOCK11Q5JSL3 2073 aa17.65■□□□□ 0.42
CCM2-206ENST00000474617 SMCO3A2RU48 225 aa17.64■□□□□ 0.41
CCM2-206ENST00000474617 F12P00748 615 aaPredicted RBP17.64■□□□□ 0.41
CCM2-206ENST00000474617 GNLYP22749 145 aa17.64■□□□□ 0.41
CCM2-206ENST00000474617 GPX4P36969 197 aaPredicted RBP17.64■□□□□ 0.41
CCM2-206ENST00000474617 AVPI1Q5T686 147 aa17.64■□□□□ 0.41
CCM2-206ENST00000474617 SLC35E3Q7Z769 313 aa17.64■□□□□ 0.41
CCM2-206ENST00000474617 TMEM170AQ8WVE7 144 aa17.64■□□□□ 0.41
CCM2-206ENST00000474617 A6NNC1 897 aa17.63■□□□□ 0.41
CCM2-206ENST00000474617 RPL29P47914 159 aaKnown RBP17.63■□□□□ 0.41
CCM2-206ENST00000474617 CDC34P49427 236 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms