RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TMEM231Q9H6L2 316 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 RFNGQ9Y644 331 aa5.52□□□□□ -1.53
MSH2-204ENST00000461394 SPENQ96T58 3664 aaKnown RBP5.52□□□□□ -1.53
MSH2-204ENST00000461394 PKDREJQ9NTG1 2253 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 NCOR2Q9Y618 2525 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 IGHV1-3A0A0C4DH29 117 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 TEX50A0A1B0GTY4 177 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 C15orf62A8K5M9 175 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 SLC25A17O43808 307 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 ACTL6BO94805 426 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 IGHV2-5P01817 119 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 IGHV4-39P01824 125 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 H2AFB1P0C5Y9 115 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 RNF224P0DH78 156 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 USF1P22415 310 aaPredicted RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 NPY1RP25929 384 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 HTR1DP28221 377 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 SNCAP37840 140 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 ATP5J2P56134 94 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 GNB1P62873 340 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 RPL8P62917 257 aaKnown RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 ERHP84090 104 aaKnown RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 AKR1C1Q04828 323 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 POU2AF1Q16633 256 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 LRRC75BQ2VPJ9 315 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 CLEC2AQ6UVW9 174 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 UQCC3Q6UW78 93 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 C8orf86Q6ZUL3 223 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 ZNF429Q86V71 674 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 CCDC28AQ8IWP9 274 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 STPG2Q8N412 459 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 C11orf42Q8N5U0 333 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 LY6G5BQ8NDX9 201 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 SLC24A4Q8NFF2 622 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 OR1L8Q8NGR8 309 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 OR4A5Q8NH83 315 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 CLDND2Q8NHS1 167 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 TAF15Q92804 592 aaKnown RBP eCLIP5.51□□□□□ -1.53
MSH2-204ENST00000461394 LINC00052Q96N35 136 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 PBDC1Q9BVG4 233 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 BPESC1Q9GZL8 116 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 WDR61Q9GZS3 305 aaKnown RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 EIF5A2Q9GZV4 153 aaKnown RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 BARX1Q9HBU1 254 aaPredicted RBP5.51□□□□□ -1.53
MSH2-204ENST00000461394 LPAR2Q9HBW0 351 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 TMEM14BQ9NUH8 114 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 BET1LQ9NYM9 111 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 HILPDAQ9Y5L2 63 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 ARID1AO14497 2285 aa5.51□□□□□ -1.53
MSH2-204ENST00000461394 ATRXP46100 2492 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 MAP1BP46821 2468 aaKnown RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 IGHV2-70DA0A0C4DH43 119 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 A0A1W2PN81 502 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 SRRM4A7MD48 611 aaKnown RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 A8MXK9 166 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 F8W036 122 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 ZNF561-AS1K7EIQ3 104 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 OVOL3O00110 214 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 RRHO14718 337 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 FOXH1O75593 365 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 TOX4O94842 621 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 CA2P00918 260 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 HBE1P02100 147 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 APOC3P02656 99 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 CHRNA7P36544 502 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 VDAC2P45880 294 aaPredicted RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 LGALS7P47929 136 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 FHITP49789 147 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 ZNF137PP52743 207 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PRCDQ00LT1 54 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 DEFA5Q01523 94 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 HES1Q14469 280 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PEA15Q15121 130 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 TNXAQ16473 311 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PDLIM3Q53GG5 364 aaPredicted RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 TMEM41BQ5BJD5 291 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 FFAR4Q5NUL3 377 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 TPTE2P1Q5T6R2 138 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 BTNL8Q6UX41 500 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 DPPA3Q6W0C5 159 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PUSL1Q8N0Z8 303 aaKnown RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 COMMD1Q8N668 190 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 KIR3DL3Q8N743 410 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 Q8N7P7 452 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 LFNGQ8NES3 379 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 OR4P4Q8NGL7 312 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 OR5B3Q8NH48 314 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 ST6GALNAC6Q969X2 333 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PERPQ96FX8 193 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 PSMG3Q9BT73 122 aaPredicted RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 KIAA1456Q9P272 454 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 DPM3Q9P2X0 92 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 METTL1Q9UBP6 276 aaKnown RBP5.5□□□□□ -1.53
MSH2-204ENST00000461394 ZNF257Q9Y2Q1 563 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 FAM96BQ9Y3D0 163 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 BSNQ9UPA5 3926 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 USF3Q68DE3 2245 aa5.5□□□□□ -1.53
MSH2-204ENST00000461394 RNASEK-C17orf49H0YIS7 233 aa5.49□□□□□ -1.53
MSH2-204ENST00000461394 TIMM23O14925 209 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms