RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 HSPB1P04792 205 aaKnown RBP11.17□□□□□ -0.62
RBM39-216ENST00000444878 SRP19P09132 144 aaKnown RBP11.17□□□□□ -0.62
RBM39-216ENST00000444878 COL8A2P25067 703 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 CD1BP29016 333 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 CEBPGP53567 150 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 FGF8P55075 233 aaPredicted RBP11.17□□□□□ -0.62
RBM39-216ENST00000444878 RAB11AP62491 216 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 AWAT1Q58HT5 328 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 ACSM6Q6P461 480 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 UNQ6494/PRO21346Q6UXR6 183 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 MAP1LC3BQ9GZQ8 125 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 RPS10P5Q9NQ39 176 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 SLC39A9Q9NUM3 307 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 ZFP92A6NM28 416 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 J3QR06 171 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 IFNA4P05014 189 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 TMEM155Q4W5P6 130 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 FFAR4Q5NUL3 377 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 RPP25LQ8N5L8 163 aaKnown RBP11.17□□□□□ -0.62
RBM39-216ENST00000444878 C20orf24Q9BUV8 137 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 MRPL20Q9BYC9 149 aaKnown RBP11.17□□□□□ -0.62
RBM39-216ENST00000444878 PRORYQ9H606 182 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 PRNDQ9UKY0 176 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 OR51B2Q9Y5P1 312 aa11.17□□□□□ -0.62
RBM39-216ENST00000444878 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 IGKV1D-33P01593 117 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 IGKV1-33P01594 117 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 CTRB1P17538 263 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 MDKP21741 143 aaPredicted RBP11.16□□□□□ -0.62
RBM39-216ENST00000444878 DLX6P56179 175 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 CTRB2Q6GPI1 263 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 TMEM204Q9BSN7 226 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 GGACTQ9BVM4 153 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 HINT2Q9BX68 163 aa11.16□□□□□ -0.62
RBM39-216ENST00000444878 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 C7orf77A4D0Y5 90 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 SRRM4A7MD48 611 aaKnown RBP11.15□□□□□ -0.62
RBM39-216ENST00000444878 UPK2O00526 184 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 AKR1C3P42330 323 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 REG1BP48304 166 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 PPOXP50336 477 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 LINC00311Q8N616 119 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 C8orf31Q8N9H6 132 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 SLC24A4Q8NFF2 622 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 OR10G4Q8NGN3 311 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 OR10G9Q8NGN4 311 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 OR10G7Q8NGN6 311 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
RBM39-216ENST00000444878 LHX4Q969G2 390 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 TMEM186Q96B77 213 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 RALYQ9UKM9 306 aaKnown RBP11.15□□□□□ -0.62
RBM39-216ENST00000444878 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 PUS1Q9Y606 427 aaKnown RBP eCLIP11.15□□□□□ -0.62
RBM39-216ENST00000444878 H0YJW9 148 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 IL6RP08887 468 aaPredicted RBP11.15□□□□□ -0.62
RBM39-216ENST00000444878 FBP1P09467 338 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 IGHV1-8P0DP01 117 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 BCL2P10415 239 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 OR5AN1Q8NGI8 311 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 ZNF596Q8TC21 504 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 HARBI1Q96MB7 349 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 SLC25A22Q9H936 323 aa11.15□□□□□ -0.62
RBM39-216ENST00000444878 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 CTXND1A0A1B0GTU2 59 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 MPDU1O75352 247 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 EIF3GO75821 320 aaKnown RBP eCLIP11.14□□□□□ -0.63
RBM39-216ENST00000444878 KBTBD11O94819 623 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 SAA1P0DJI8 122 aaPredicted RBP11.14□□□□□ -0.63
RBM39-216ENST00000444878 MYOD1P15172 320 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 NPY1RP25929 384 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 OR9G1Q8NH87 305 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 TMEM170AQ8WVE7 144 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
RBM39-216ENST00000444878 RAB1BQ9H0U4 201 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 BET1LQ9NYM9 111 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 ZNF257Q9Y2Q1 563 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 PRSS46E5RG02 174 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 IFNA1P01562 189 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 DLK1P80370 383 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 RHEBQ15382 184 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 FLYWCH2Q96CP2 140 aaKnown RBP11.14□□□□□ -0.63
RBM39-216ENST00000444878 PLEKHA3Q9HB20 300 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 FKBP11Q9NYL4 201 aa11.14□□□□□ -0.63
RBM39-216ENST00000444878 ITPR1Q14643 2758 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 HMGB3O15347 200 aaKnown RBP11.13□□□□□ -0.63
RBM39-216ENST00000444878 TSPAN9O75954 239 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 FSTL3O95633 263 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 IGHV2-70P01814 119 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 DIAPH2-AS1Q14236 149 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 ACOT6Q3I5F7 207 aaPredicted RBP11.13□□□□□ -0.63
RBM39-216ENST00000444878 AVPI1Q5T686 147 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
RBM39-216ENST00000444878 NABP2Q9BQ15 211 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms