RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 TUBA4BQ9H853 241 aa13.34□□□□□ -0.27
SBDSP1-203ENST00000437201 COMMD9Q9P000 198 aa13.34□□□□□ -0.27
SBDSP1-203ENST00000437201 THYN1Q9P016 225 aa13.34□□□□□ -0.27
SBDSP1-203ENST00000437201 KLK9Q9UKQ9 250 aa13.34□□□□□ -0.27
SBDSP1-203ENST00000437201 ANAPC10Q9UM13 185 aa13.34□□□□□ -0.27
SBDSP1-203ENST00000437201 TRBV7-1A0A0A6YYK4 115 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 LGALS9O00182 355 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 UPK2O00526 184 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 NAT1P18440 290 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 S100GP29377 79 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 RFX2P48378 723 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 MECP2P51608 486 aaKnown RBP13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 OR2B8PP59922 312 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 FAM106AQ4KMX7 169 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 THOC7Q6I9Y2 204 aaKnown RBP13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 HSD17B13Q7Z5P4 300 aaPredicted RBP13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 GPHB5Q86YW7 130 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 OR6F1Q8NGZ6 308 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 DYNLRB2Q8TF09 96 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 FANCD2OSQ96PS1 177 aa13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
SBDSP1-203ENST00000437201 A0A1B0GW64 132 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 PMP2P02689 132 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 ARL3P36405 182 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 LPCAT3Q6P1A2 487 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 MUC7Q8TAX7 377 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 TM2D3Q9BRN9 247 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 TMEM140Q9NV12 185 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 NBEAL2Q6ZNJ1 2754 aa13.32□□□□□ -0.28
SBDSP1-203ENST00000437201 NDUFB8O95169 186 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 OR2C1O95371 312 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 APOA1P02647 267 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 F2RP25116 425 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 CLEC19AQ6UXS0 136 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 THAP7Q9BT49 309 aaPredicted RBP13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 FUNDC2Q9BWH2 189 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 QTRT1Q9BXR0 403 aaKnown RBP13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 SCPEP1Q9HB40 452 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 COMMD3Q9UBI1 195 aa13.31□□□□□ -0.28
SBDSP1-203ENST00000437201 STAB2Q8WWQ8 2551 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 IGLV11-55A0A075B6I3 123 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 GPR31O00270 319 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 PGLYRP1O75594 196 aaPredicted RBP13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 S1PR2O95136 353 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 RLN1P04808 185 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 REG1AP05451 166 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 FOLR2P14207 255 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 TSPAN5P62079 268 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 CD300EQ496F6 205 aaPredicted RBP13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 CADM3Q8N126 398 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 DGCR14Q96DF8 476 aaKnown RBP13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 SPATA25Q9BR10 227 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 DMRT1Q9Y5R6 373 aa13.3□□□□□ -0.28
SBDSP1-203ENST00000437201 MARCH11A6NNE9 402 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 SNAPC5O75971 98 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 TPPPO94811 219 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 HLA-AP01891 365 aaKnown RBP13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 TRAPPC2P0DI81 140 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 TRAPPC2BP0DI82 140 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 HRH1P35367 487 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 RORCP51449 518 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 DEFB114Q30KQ6 69 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 C19orf35Q6ZS72 473 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 OR1L8Q8NGR8 309 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 GPX8Q8TED1 209 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 CCDC140Q96MF4 163 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 CITED4Q96RK1 184 aa13.29□□□□□ -0.28
SBDSP1-203ENST00000437201 TRAV3A0A0B4J244 114 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 ZNF320A2RRD8 509 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 IZUMO1RA6ND01 250 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 CGB1A6NKQ9 187 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 IGHV3-23P01764 117 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 IFNA6P05013 189 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 CLEC3BP05452 202 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 EIF4EP06730 217 aaKnown RBP13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 MYOD1P15172 320 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 HLA-DMAP28067 261 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 LPAR6P43657 344 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 CD81P60033 236 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 VBP1P61758 197 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 NCS1P62166 190 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 MZT2AQ6P582 158 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 LYSMD2Q8IV50 215 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 AP3S1Q92572 193 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 PALMDQ9NP74 551 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 FAM212BQ9NTI7 297 aaPredicted RBP13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 FKBP11Q9NYL4 201 aa13.28□□□□□ -0.28
SBDSP1-203ENST00000437201 KRASP01116 189 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 LYL1P12980 280 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 CBLN1P23435 193 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 PTBP1P26599 531 aaKnown RBP eCLIP13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 RCVRNP35243 200 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 GUCA2BQ16661 112 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 HAGHQ16775 308 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 ADAMTSL5Q6ZMM2 481 aa13.27□□□□□ -0.29
SBDSP1-203ENST00000437201 GDPD1Q8N9F7 314 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms