RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 TRAV3A0A0B4J244 114 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 A0A0B4J293 547 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
COL11A1-204ENST00000427239 OR9G9P0C7N8 305 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 TRAPPC2P0DI81 140 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 TRAPPC2BP0DI82 140 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 SLC25A6P12236 298 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 FXYD3Q14802 87 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 SLC35E3Q7Z769 313 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 OR51J1Q9H342 316 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 C16orf95Q9H693 158 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 SLA2Q9H6Q3 261 aa12.2□□□□□ -0.46
COL11A1-204ENST00000427239 A0A0G2JRQ6 117 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 SH2D7A6NKC9 451 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-204ENST00000427239 NDUFA7O95182 113 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 SULT1A3P0DMM9 295 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 SULT1A4P0DMN0 295 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 COMPP49747 757 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-204ENST00000427239 GNB1P62873 340 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 TNXAQ16473 311 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 GGNBP1Q5YKI7 109 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 Q6ZRM9 215 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 Q6ZS46 218 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 Q6ZSV7 163 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 FOXRED2Q8IWF2 684 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 OR5B3Q8NH48 314 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 OR2T6Q8NHC8 308 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 GRPEL2Q8TAA5 225 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 SPIN2AQ99865 258 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 SPIN2BQ9BPZ2 258 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 HSPB9Q9BQS6 159 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 FOXA2Q9Y261 457 aaPredicted RBP12.19□□□□□ -0.46
COL11A1-204ENST00000427239 ZNF257Q9Y2Q1 563 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 ALG5Q9Y673 324 aa12.19□□□□□ -0.46
COL11A1-204ENST00000427239 ATRQ13535 2644 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 C15orf61A6NNL5 157 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 SSNA1O43805 119 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 ADAP1O75689 374 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 IGF1P05019 195 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 SMCO1Q147U7 214 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 IZUMO4Q1ZYL8 232 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 ZFP69Q49AA0 526 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 AARDQ4LEZ3 155 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 ARSJQ5FYB0 599 aaPredicted RBP12.18□□□□□ -0.46
COL11A1-204ENST00000427239 NSG2Q9Y328 171 aa12.18□□□□□ -0.46
COL11A1-204ENST00000427239 C2CD3Q4AC94 2353 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 AP4M1O00189 453 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 HSPE1P61604 102 aaKnown RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 SSBP2P81877 361 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 TMEM267Q0VDI3 215 aaPredicted RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 OR1L8Q8NGR8 309 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 OR4F5Q8NH21 305 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 CACNG5Q9UF02 275 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 OR51B2Q9Y5P1 312 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 TEX50A0A1B0GTY4 177 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 LINC01548A6NM66 108 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 HKR1P10072 659 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 RPL27AP46776 148 aaKnown RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 SRSF2Q01130 221 aaKnown RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 AKIRIN2Q53H80 203 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 OR52E5Q8NH55 327 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 SRSF12Q8WXF0 261 aaKnown RBP12.17□□□□□ -0.46
COL11A1-204ENST00000427239 TMEM68Q96MH6 324 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 GON7Q9BXV9 100 aa12.17□□□□□ -0.46
COL11A1-204ENST00000427239 TNCP24821 2201 aa12.16□□□□□ -0.46
COL11A1-204ENST00000427239 MSGN1A6NI15 193 aa12.16□□□□□ -0.46
COL11A1-204ENST00000427239 VDAC2P45880 294 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-204ENST00000427239 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
COL11A1-204ENST00000427239 OR2B8PP59922 312 aa12.16□□□□□ -0.46
COL11A1-204ENST00000427239 SRSF8Q9BRL6 282 aaKnown RBP12.16□□□□□ -0.46
COL11A1-204ENST00000427239 QTRT1Q9BXR0 403 aaKnown RBP12.16□□□□□ -0.46
COL11A1-204ENST00000427239 PARP11Q9NR21 331 aa12.16□□□□□ -0.46
COL11A1-204ENST00000427239 NDUFA4L2Q9NRX3 87 aa12.16□□□□□ -0.46
COL11A1-204ENST00000427239 A0A1B0GUS0 222 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 ATP6V0E1O15342 81 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 PITX3O75364 302 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 IFNA17P01571 189 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 EGR2P11161 476 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-204ENST00000427239 GSG1LQ6UXU4 331 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 HSD17B13Q7Z5P4 300 aaPredicted RBP12.15□□□□□ -0.46
COL11A1-204ENST00000427239 OR1S1Q8NH92 325 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 LINC01006Q8NI28 216 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 ABHD5Q8WTS1 349 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 SERTAD4Q9NUC0 356 aa12.15□□□□□ -0.46
COL11A1-204ENST00000427239 FBN1P35555 2871 aaKnown RBP12.15□□□□□ -0.46
COL11A1-204ENST00000427239 C13orf42A0A1B0GVH6 325 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 C5orf51A6NDU8 294 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 MPTX1A8MV57 137 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 OPN1MWP04001 364 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 OPN1MW2P0DN77 364 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 OPN1MW3P0DN78 364 aa12.14□□□□□ -0.47
COL11A1-204ENST00000427239 SPCS3P61009 180 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms