RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CHRNA7P36544 502 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 DYNLT3P51808 116 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM267Q0VDI3 215 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-202ENST00000345734 USF2Q15853 346 aaPredicted RBP7.56□□□□□ -1.2
ATG4A-202ENST00000345734 MIDNQ504T8 468 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 OR5T1Q8NG75 326 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 SLC25A31Q9H0C2 315 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 RAB9BQ9NP90 201 aa7.56□□□□□ -1.2
ATG4A-202ENST00000345734 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF705EA8MWA4 302 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 LY6HO94772 140 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 METTL15P1P0C7V9 234 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 DAOP14920 347 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RAB7AP51149 207 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 MRPS11P82912 194 aaKnown RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 AKIRIN2Q53H80 203 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 LRRC10Q5BKY1 277 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 LYG1Q8N1E2 194 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 TCTEX1D1Q8N7M0 179 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 HSD17B11Q8NBQ5 300 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 OR10A7Q8NGE5 316 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 OR5C1Q8NGR4 320 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 FAM216AQ8WUB2 273 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 ITLN2Q8WWU7 325 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RAB40CQ96S21 281 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 GINS3Q9BRX5 216 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 FAM212BQ9NTI7 297 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RPUSD1Q9UJJ7 312 aaKnown RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RFNGQ9Y644 331 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 ARHGAP32A7KAX9 2087 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 BORCS7-ASMTA0A0B4J1R7 106 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RAB29O14966 203 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 IFNA17P01571 189 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 SOD3P08294 240 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 CDKN1BP46527 198 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 CDX1P47902 265 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 PPT1P50897 306 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RPL23AP62750 156 aaKnown RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 MEF2CQ06413 473 aaPredicted RBP7.55□□□□□ -1.2
ATG4A-202ENST00000345734 H2BFWTQ7Z2G1 175 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 C1QL4Q86Z23 238 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 VKORC1L1Q8N0U8 176 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 OR5R1Q8NH85 324 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF714Q96N38 554 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 RBKSQ9H477 322 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 PSENENQ9NZ42 101 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 LPAR3Q9UBY5 353 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 TNCP24821 2201 aa7.55□□□□□ -1.2
ATG4A-202ENST00000345734 A0A1W2PPR1 153 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 OR9G9P0C7N8 305 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 HOXA5P20719 270 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 HNF1AP20823 631 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SULT1A2P50226 295 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 PPOXP50336 477 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 UBE2KP61086 200 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 BAXQ07812 192 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SPINK9Q5DT21 86 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 EIF5AL1Q6IS14 154 aaKnown RBP7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SMIM15Q7Z3B0 74 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 BCL6BQ8N143 479 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-202ENST00000345734 CD300LFQ8TDQ1 290 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 DDB2Q92466 427 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 S1PR3Q99500 378 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-202ENST00000345734 GAR1Q9NY12 217 aaKnown RBP7.54□□□□□ -1.2
ATG4A-202ENST00000345734 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 HSPB7Q9UBY9 170 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 WSB1Q9Y6I7 421 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 FAM90A26D6RGX4 464 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 C19orf84I3L1E1 186 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 HPRT1P00492 218 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SULT1A1P50225 295 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 BLOC1S1P78537 153 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 ARL16Q0P5N6 197 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 HEPN1Q6WQI6 88 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SLC25A48Q6ZT89 311 aaKnown RBP7.54□□□□□ -1.2
ATG4A-202ENST00000345734 SMIM8Q96KF7 97 aa7.54□□□□□ -1.2
ATG4A-202ENST00000345734 CXorf65A6NEN9 183 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 RBMXL2O75526 392 aaKnown RBP7.53□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF25P17030 456 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-202ENST00000345734 ADCYAP1P18509 176 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 FHITP49789 147 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 DLX6P56179 175 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 OR2B8PP59922 312 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 TMEM30BQ3MIR4 351 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 SPANXN5Q5MJ07 72 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 C11orf71Q6IPW1 123 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 HAPLN4Q86UW8 402 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.53□□□□□ -1.2
ATG4A-202ENST00000345734 HIST1H2BAQ96A08 127 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 QTRT1Q9BXR0 403 aaKnown RBP7.53□□□□□ -1.2
ATG4A-202ENST00000345734 HRH4Q9H3N8 390 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 CBLN4Q9NTU7 201 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 LAMP3Q9UQV4 416 aa7.53□□□□□ -1.2
ATG4A-202ENST00000345734 UTP20O75691 2785 aaKnown RBP7.53□□□□□ -1.2
ATG4A-202ENST00000345734 TRAV3A0A0B4J244 114 aa7.52□□□□□ -1.2
ATG4A-202ENST00000345734 RBFOX2O43251 390 aaKnown RBP eCLIP7.52□□□□□ -1.2
ATG4A-202ENST00000345734 GGCTO75223 188 aaKnown RBP7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms