RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 RRNAD1Q96FB5 475 aaKnown RBP13.8□□□□□ -0.2
CHGA-202ENST00000334654 OR51J1Q9H342 316 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 SERTAD4Q9NUC0 356 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 TMEM14BQ9NUH8 114 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 MPTX1A8MV57 137 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 CREBL2O60519 120 aaPredicted RBP13.8□□□□□ -0.2
CHGA-202ENST00000334654 HLA-GP17693 338 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 COMPP49747 757 aaPredicted RBP13.8□□□□□ -0.2
CHGA-202ENST00000334654 FXYD3Q14802 87 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 TNXAQ16473 311 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 TMEM95Q3KNT9 176 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 AKAP14Q86UN6 197 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 TMED3Q9Y3Q3 217 aa13.8□□□□□ -0.2
CHGA-202ENST00000334654 C15orf61A6NNL5 157 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 HKR1P10072 659 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 MAS1LP35410 378 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 OR2B8PP59922 312 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 KRTAP24-1Q3LI83 254 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 AARDQ4LEZ3 155 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 FOXRED2Q8IWF2 684 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 LINC01006Q8NI28 216 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 MED28Q9H204 178 aa13.79□□□□□ -0.2
CHGA-202ENST00000334654 FOXA2Q9Y261 457 aaPredicted RBP13.79□□□□□ -0.2
CHGA-202ENST00000334654 PIGBOS1A0A0B4J2F0 54 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 TEX50A0A1B0GTY4 177 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 ATP6V0E1O15342 81 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 IGF1P05019 195 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 CRIP2P52943 208 aaPredicted RBP13.78□□□□□ -0.2
CHGA-202ENST00000334654 GNB1P62873 340 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 C19orf54Q5BKX5 351 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 ZNF429Q86V71 674 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 SRSF12Q8WXF0 261 aaKnown RBP13.78□□□□□ -0.2
CHGA-202ENST00000334654 FAM103A1Q9BTL3 118 aaKnown RBP13.78□□□□□ -0.2
CHGA-202ENST00000334654 QTRT1Q9BXR0 403 aaKnown RBP13.78□□□□□ -0.2
CHGA-202ENST00000334654 CACNG5Q9UF02 275 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 PRNDQ9UKY0 176 aa13.78□□□□□ -0.2
CHGA-202ENST00000334654 A0A1B0GU03 582 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 PITX3O75364 302 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 SNAPC5O75971 98 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 OPN1MWP04001 364 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 OPN1MW2P0DN77 364 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 OPN1MW3P0DN78 364 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 ASPHD1Q5U4P2 390 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 OR4A16Q8NH70 328 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 RNASE11Q8TAA1 199 aaKnown RBP13.77□□□□□ -0.21
CHGA-202ENST00000334654 ASB13Q8WXK3 278 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 ARPC1AQ92747 370 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 OR10C1Q96KK4 312 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 NOL4LQ96MY1 436 aaPredicted RBP13.77□□□□□ -0.21
CHGA-202ENST00000334654 COA4Q9NYJ1 87 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 LINC00527Q9UJ94 153 aa13.77□□□□□ -0.21
CHGA-202ENST00000334654 MSGN1A6NI15 193 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 TEX22C9J3V5 150 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 CCSO14618 274 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 ST8SIA3O43173 380 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 KCNAB3O43448 404 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 CCNKO75909 580 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 CNIH1O95406 144 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 SULT1A3P0DMM9 295 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 SULT1A4P0DMN0 295 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 SLC25A6P12236 298 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 RPL27AP46776 148 aaKnown RBP13.76□□□□□ -0.21
CHGA-202ENST00000334654 SMCO1Q147U7 214 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 SGMS2Q8NHU3 365 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 WNT10AQ9GZT5 417 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 PARP11Q9NR21 331 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 NDUFA4L2Q9NRX3 87 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.76□□□□□ -0.21
CHGA-202ENST00000334654 ZNF580Q9UK33 172 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 ZNF257Q9Y2Q1 563 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 OR51B2Q9Y5P1 312 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 TENM1Q9UKZ4 2725 aa13.76□□□□□ -0.21
CHGA-202ENST00000334654 HSPE1P61604 102 aaKnown RBP13.75□□□□□ -0.21
CHGA-202ENST00000334654 OR5B3Q8NH48 314 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 OR2T6Q8NHC8 308 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 GRPEL2Q8TAA5 225 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 COMMD5Q9GZQ3 224 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 FKBP11Q9NYL4 201 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 COL6A5A8TX70 2615 aa13.75□□□□□ -0.21
CHGA-202ENST00000334654 TMEM89A2RUT3 159 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 G3V318 75 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 AP4M1O00189 453 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 ACTL6BO94805 426 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 IFNA21P01568 189 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 HNRNPCP07910 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHGA-202ENST00000334654 MDKP21741 143 aaPredicted RBP13.74□□□□□ -0.21
CHGA-202ENST00000334654 VDAC2P45880 294 aaPredicted RBP13.74□□□□□ -0.21
CHGA-202ENST00000334654 STPG2Q8N412 459 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 LFNGQ8NES3 379 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 OR1L8Q8NGR8 309 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 OR4F5Q8NH21 305 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 WIPF2Q8TF74 440 aaPredicted RBP13.74□□□□□ -0.21
CHGA-202ENST00000334654 WSB1Q9Y6I7 421 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 SSNA1O43805 119 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 PPIFP30405 207 aaKnown RBP13.74□□□□□ -0.21
CHGA-202ENST00000334654 CFHR3Q02985 330 aa13.74□□□□□ -0.21
CHGA-202ENST00000334654 PDLIM3Q53GG5 364 aaPredicted RBP13.74□□□□□ -0.21
CHGA-202ENST00000334654 AKIRIN2Q53H80 203 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms