RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 TSPAN9O75954 239 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 ACTL6BO94805 426 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 CRYBA1P05813 215 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 MYOD1P15172 320 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 SMCO1Q147U7 214 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 FXYD3Q14802 87 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 TNXAQ16473 311 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.59□□□□□ -0.23
SKP2-201ENST00000274254 FKBP11Q9NYL4 201 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 LINC01548A6NM66 108 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 CCSO14618 274 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 GNB1P62873 340 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 C10orf55Q5SWW7 151 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 Q6ZSV7 163 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 PRIMA1Q86XR5 153 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 OR5B3Q8NH48 314 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 ARPC1AQ92747 370 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 OR10C1Q96KK4 312 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 SPIN2AQ99865 258 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 SPIN2BQ9BPZ2 258 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 QTRT1Q9BXR0 403 aaKnown RBP13.59□□□□□ -0.23
SKP2-201ENST00000274254 COMMD5Q9GZQ3 224 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 ZNF257Q9Y2Q1 563 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 OR51B2Q9Y5P1 312 aa13.59□□□□□ -0.23
SKP2-201ENST00000274254 A0A1B0GW64 132 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 E7EUB6 86 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 ST8SIA3O43173 380 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 KCNAB3O43448 404 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 RBMXL2O75526 392 aaKnown RBP13.58□□□□□ -0.24
SKP2-201ENST00000274254 CNIH1O95406 144 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 EGR2P11161 476 aaPredicted RBP13.58□□□□□ -0.24
SKP2-201ENST00000274254 C9orf152Q5JTZ5 239 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 THOC7Q6I9Y2 204 aaKnown RBP13.58□□□□□ -0.24
SKP2-201ENST00000274254 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 OR5M8Q8NGP6 311 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 SRSF12Q8WXF0 261 aaKnown RBP13.58□□□□□ -0.24
SKP2-201ENST00000274254 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.24
SKP2-201ENST00000274254 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
SKP2-201ENST00000274254 TEX50A0A1B0GTY4 177 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 CGB1A6NKQ9 187 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 GOSR2O14653 212 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 ATP6V0E1O15342 81 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 NDUFA7O95182 113 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 IGF1P05019 195 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 RPL27AP46776 148 aaKnown RBP13.57□□□□□ -0.24
SKP2-201ENST00000274254 CRIP2P52943 208 aaPredicted RBP13.57□□□□□ -0.24
SKP2-201ENST00000274254 IAH1Q2TAA2 248 aaPredicted RBP13.57□□□□□ -0.24
SKP2-201ENST00000274254 PDLIM3Q53GG5 364 aaPredicted RBP13.57□□□□□ -0.24
SKP2-201ENST00000274254 OR1L8Q8NGR8 309 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 OR52E5Q8NH55 327 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 MED28Q9H204 178 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 NDUFA4L2Q9NRX3 87 aa13.57□□□□□ -0.24
SKP2-201ENST00000274254 C13orf42A0A1B0GVH6 325 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 C5orf51A6NDU8 294 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 OPN1MWP04001 364 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 OPN1MW2P0DN77 364 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 OPN1MW3P0DN78 364 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 HSPE1P61604 102 aaKnown RBP13.56□□□□□ -0.24
SKP2-201ENST00000274254 RRAS2P62070 204 aaPredicted RBP13.56□□□□□ -0.24
SKP2-201ENST00000274254 GSG1LQ6UXU4 331 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 SGMS2Q8NHU3 365 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 GRPEL2Q8TAA5 225 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 FAM103A1Q9BTL3 118 aaKnown RBP13.56□□□□□ -0.24
SKP2-201ENST00000274254 C16orf95Q9H693 158 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 PARP11Q9NR21 331 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 CACFD1Q9UGQ2 172 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 ZNF580Q9UK33 172 aa13.56□□□□□ -0.24
SKP2-201ENST00000274254 FAM25EA8MYX2 175 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 AP4M1O00189 453 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 H2BFSP57053 126 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 FCN2Q15485 313 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 TMEM95Q3KNT9 176 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 ZBTB8BQ8NAP8 495 aaPredicted RBP13.55□□□□□ -0.24
SKP2-201ENST00000274254 OR11H7Q8NGC8 314 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 OR1S1Q8NH92 325 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 C2orf50Q96LR7 162 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 SERTAD4Q9NUC0 356 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 MGAT4CQ9UBM8 478 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 HSPB7Q9UBY9 170 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 ATRQ13535 2644 aa13.55□□□□□ -0.24
SKP2-201ENST00000274254 MSGN1A6NI15 193 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 TEX22C9J3V5 150 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 FAM90A26D6RGX4 464 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 SIX6O95475 246 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 CXCL3P19876 107 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 SPCS3P61009 180 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 PRCDQ00LT1 54 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 TNFRSF9Q07011 255 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 IL15RAQ13261 267 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 C19orf54Q5BKX5 351 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 CXorf66Q5JRM2 361 aaPredicted RBP13.54□□□□□ -0.24
SKP2-201ENST00000274254 OR2T6Q8NHC8 308 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 SRSF8Q9BRL6 282 aaKnown RBP13.54□□□□□ -0.24
SKP2-201ENST00000274254 PDCD10Q9BUL8 212 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 NXPH3O95157 252 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 IFNA17P01571 189 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 TRAPPC2P0DI81 140 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 TRAPPC2BP0DI82 140 aa13.54□□□□□ -0.24
SKP2-201ENST00000274254 HKR1P10072 659 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms