RNA–Protein interactions for RNA: ENST00000249064.8

CCDC117-201, Transcript of coiled-coil domain containing 117, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC117, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC117-201ENST00000249064 A0A0U1RQV5 110 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 PLAUP00749 431 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 IGKV1D-33P01593 117 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 IGKV1-33P01594 117 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 KIR2DL5AQ8N109 375 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 RBMXL3Q8N7X1 1067 aaKnown RBP11.23□□□□□ -0.61
CCDC117-201ENST00000249064 PRSS3P2Q8NHM4 247 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 PNRC2Q9NPJ4 139 aaKnown RBP11.23□□□□□ -0.61
CCDC117-201ENST00000249064 FREM2Q5SZK8 3169 aa11.23□□□□□ -0.61
CCDC117-201ENST00000249064 MED13LQ71F56 2210 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CA2P00918 260 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 GPX1P07203 203 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CELA3AP09093 270 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IGLC2P0DOY2 106 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IGLC3P0DOY3 106 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 MAS1LP35410 378 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IL11RAQ14626 422 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 C6orf15Q6UXA7 325 aaPredicted RBP11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CHRNA10Q9GZZ6 450 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IL36BQ9NZH7 164 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 FZR1Q9UM11 496 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 FRYLO94915 3013 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IGHV3-48P01763 117 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 COX6A1P12074 109 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 HTR1DP28221 377 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 EML6Q6ZMW3 1958 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CXorf1O96002 111 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CGAP01215 116 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 MAGEA5P43359 124 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 CEBPDP49716 269 aaPredicted RBP11.22□□□□□ -0.61
CCDC117-201ENST00000249064 FOXG1P55316 489 aaPredicted RBP11.22□□□□□ -0.61
CCDC117-201ENST00000249064 KCNIP2Q9NS61 270 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 TMEM56-RWDD3S4R434 201 aa11.22□□□□□ -0.61
CCDC117-201ENST00000249064 IGKV1-27A0A075B6S5 117 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 LOC389332A0A1B0GUA5 103 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 SRD5A2P31213 254 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 DTX1Q86Y01 620 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 TCFL5Q9UL49 500 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 CDIPTO14735 213 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 SIGLEC12Q96PQ1 595 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 ZNF703Q9H7S9 590 aaPredicted RBP11.21□□□□□ -0.61
CCDC117-201ENST00000249064 NOTCH3Q9UM47 2321 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 ATRXP46100 2492 aa11.21□□□□□ -0.61
CCDC117-201ENST00000249064 TMEM238C9JI98 176 aa11.21□□□□□ -0.62
CCDC117-201ENST00000249064 RBFOX2O43251 390 aaKnown RBP eCLIP11.21□□□□□ -0.62
CCDC117-201ENST00000249064 TIMP3P35625 211 aa11.21□□□□□ -0.62
CCDC117-201ENST00000249064 FA2HQ7L5A8 372 aa11.21□□□□□ -0.62
CCDC117-201ENST00000249064 LRTM2Q8N967 370 aa11.21□□□□□ -0.62
CCDC117-201ENST00000249064 CLEC7AQ9BXN2 247 aa11.21□□□□□ -0.62
CCDC117-201ENST00000249064 ACACAQ13085 2346 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 CDKN1BP46527 198 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 UBE2L3P68036 154 aaKnown RBP11.2□□□□□ -0.62
CCDC117-201ENST00000249064 ARRDC1-AS1Q9H2J1 176 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 TP73-AS1Q9UF72 201 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
CCDC117-201ENST00000249064 NPIPB13A6NJU9 1138 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 NPIPB4C9JG80 1138 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 H3BTX0 84 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 GATA2P23769 480 aaPredicted RBP11.2□□□□□ -0.62
CCDC117-201ENST00000249064 CT55Q8WUE5 264 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 OR5P3Q8WZ94 311 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 IGLV3-12A0A075B6K2 115 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 SMPD2O60906 423 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 SAP30O75446 220 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 HIST1H1EP10412 219 aaKnown RBP11.2□□□□□ -0.62
CCDC117-201ENST00000249064 GCSHP23434 173 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 LINC00205P59089 165 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 TMEM70Q9BUB7 260 aa11.2□□□□□ -0.62
CCDC117-201ENST00000249064 PEF1Q9UBV8 284 aaKnown RBP11.2□□□□□ -0.62
CCDC117-201ENST00000249064 TRAV9-2A0A087WT02 112 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 TRAV1-1A0A0B4J248 108 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 C7orf71A4D174 169 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 SH2D7A6NKC9 451 aaPredicted RBP11.19□□□□□ -0.62
CCDC117-201ENST00000249064 NPY1RP25929 384 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 RBX1P62877 108 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 FBXW9Q5XUX1 488 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 APC2O95996 2303 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 HLA-DQA1P01909 254 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 PAX9P55771 341 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 OR8B8Q15620 311 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 ZIC4Q8N9L1 334 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 ALKBH6Q3KRA9 238 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 OR1N2Q8NGR9 330 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 YPEL4Q96NS1 127 aa11.19□□□□□ -0.62
CCDC117-201ENST00000249064 RAMP3O60896 148 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 MT-ND6P03923 174 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 OR1C1Q15619 314 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 C19orf35Q6ZS72 473 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 DRAM1Q8N682 238 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 DEFB108BQ8NET1 73 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 KCNE4Q8WWG9 221 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 RCHY1Q96PM5 261 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 SH2D2AQ9NP31 389 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 DUSP13Q9UII6 198 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 TAS2R45P59539 299 aa11.18□□□□□ -0.62
CCDC117-201ENST00000249064 TNXAQ16473 311 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms