RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RIPPLY3P57055 190 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 CX3CL1P78423 397 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 DHRS2Q13268 280 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 PRSS8Q16651 343 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 MRGPRG-AS1Q2M3A8 158 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 ANKRD55Q3KP44 614 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM268Q5VZI3 342 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 SLC35E3Q7Z769 313 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 LYG2Q86SG7 212 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 LGI3Q8N145 548 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 Q8N2B8 174 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM167AQ8TBQ9 72 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 RBPMSQ93062 196 aaKnown RBP12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 C16orf95Q9H693 158 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 ZNF430Q9H8G1 570 aaPredicted RBP12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 BET1LQ9NYM9 111 aa12.36□□□□□ -0.43
PCDHGC3-204ENST00000617222 NF1P21359 2839 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 UPK2O00526 184 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 KBTBD11O94819 623 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 CNIH1O95406 144 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 PTTG1O95997 202 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 IGKV1-5P01602 117 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 IGHG2P01859 326 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 IL6RP08887 468 aaPredicted RBP12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 MECP2P51608 486 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 AKR1C2P52895 323 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 GNB1P62873 340 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 TMEM95Q3KNT9 176 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 H2BFWTQ7Z2G1 175 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR52B4Q8NGK2 314 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR4A5Q8NH83 315 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR2T6Q8NHC8 308 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 RNASE11Q8TAA1 199 aaKnown RBP12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 SEC22CQ9BRL7 303 aa12.35□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR9G9P0C7N8 305 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 VDAC2P45880 294 aaPredicted RBP12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 SRPXP78539 464 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 FXYD3Q14802 87 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 TNXAQ16473 311 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 IZUMO4Q1ZYL8 232 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 RGS21Q2M5E4 152 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 ZNF562Q6V9R5 426 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 MMD2Q8IY49 270 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 LINC01006Q8NI28 216 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 IL22RA2Q969J5 263 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 RRNAD1Q96FB5 475 aaKnown RBP12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 MARVELD1Q9BSK0 173 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 OR51J1Q9H342 316 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 LINC00527Q9UJ94 153 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 NSG2Q9Y328 171 aa12.34□□□□□ -0.43
PCDHGC3-204ENST00000617222 A0A0G2JRQ6 117 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 KCNAB3O43448 404 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 CREBL2O60519 120 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 SNAPC5O75971 98 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 ACTL6BO94805 426 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 DUS4LO95620 317 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 IL5P05113 134 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 MDKP21741 143 aaPredicted RBP12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 RPL8P62917 257 aaKnown RBP12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 NDPQ00604 133 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 LYZL2Q7Z4W2 148 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 CADM3Q8N126 398 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 SLC35G3Q8N808 338 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 ABHD5Q8WTS1 349 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 TMEM158Q8WZ71 300 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 GPR146Q96CH1 333 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 C19orf24Q9BVV8 132 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 PARP11Q9NR21 331 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 SERTAD4Q9NUC0 356 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 MMP24Q9Y5R2 645 aa12.33□□□□□ -0.44
PCDHGC3-204ENST00000617222 A0A0B4J2A0 478 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 TMEM89A2RUT3 159 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 CLPSL1A2RUU4 121 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 DHFRP00374 187 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 P0C879 139 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 MYOD1P15172 320 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 HLA-GP17693 338 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 SSBP2P81877 361 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 C10orf55Q5SWW7 151 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 FOXRED2Q8IWF2 684 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 LRTM2Q8N967 370 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 OR4A16Q8NH70 328 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 COQ8AQ8NI60 647 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 GRPEL2Q8TAA5 225 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 ZNF431Q8TF32 576 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 ARPC1AQ92747 370 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 NOL4LQ96MY1 436 aaPredicted RBP12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 FAM103A1Q9BTL3 118 aaKnown RBP12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 SHPKQ9UHJ6 478 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 FBXO7Q9Y3I1 522 aa12.32□□□□□ -0.44
PCDHGC3-204ENST00000617222 A0A0B4J293 547 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 AP4M1O00189 453 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 ATP6V0E1O15342 81 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 OPN1MWP04001 364 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 HOXB5P09067 269 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 EGR2P11161 476 aaPredicted RBP12.31□□□□□ -0.44
PCDHGC3-204ENST00000617222 MAS1LP35410 378 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms