RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PUS1Q9Y606 427 aaKnown RBP eCLIP22.99■■□□□ 1.27
CSPG5-205ENST00000610462 FAM90A27PA6NNH2 459 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CT45A6P0DMU7 189 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CT45A5P0DMU8 189 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CT45A7P0DMV0 189 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CHRNB4P30926 498 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 ERVFRD-1P60508 538 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 LRRC10Q5BKY1 277 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CYB561D1Q8N8Q1 229 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 SLC39A9Q9NUM3 307 aa22.98■■□□□ 1.27
CSPG5-205ENST00000610462 FOXA2Q9Y261 457 aaPredicted RBP22.98■■□□□ 1.27
CSPG5-205ENST00000610462 CCL21O00585 134 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 BCL2P10415 239 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 CCL3L1P16619 93 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 ZNF709Q8N972 641 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 LINC01560Q8TB33 94 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 TUBA4BQ9H853 241 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 BIN3Q9NQY0 253 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 TMEM14BQ9NUH8 114 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 ROS1P08922 2347 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 ARFGEF3Q5TH69 2177 aa22.97■■□□□ 1.27
CSPG5-205ENST00000610462 ZFP92A6NM28 416 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 C17orf112F2Z3M2 114 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 FFAR4Q5NUL3 377 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 H1FXQ92522 213 aaKnown RBP22.96■■□□□ 1.27
CSPG5-205ENST00000610462 ZNRD1Q9P1U0 126 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 WDR83OSQ9Y284 106 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 POLEQ07864 2286 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 PLAUP00749 431 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 FOLR2P14207 255 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 CD1BP29016 333 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 HOXA1P49639 335 aaPredicted RBP22.96■■□□□ 1.27
CSPG5-205ENST00000610462 CEBPGP53567 150 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 PMS2P11Q13670 270 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 ZNF833PQ6ZTB9 187 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 SLC35D1Q9NTN3 355 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 KAAG1Q9UBP8 84 aa22.96■■□□□ 1.27
CSPG5-205ENST00000610462 H3BQ15 152 aa22.95■■□□□ 1.26
CSPG5-205ENST00000610462 RRHO14718 337 aa22.95■■□□□ 1.26
CSPG5-205ENST00000610462 HSPE1P61604 102 aaKnown RBP22.95■■□□□ 1.26
CSPG5-205ENST00000610462 RTL8BQ17RB0 113 aa22.95■■□□□ 1.26
CSPG5-205ENST00000610462 GGACTQ9BVM4 153 aa22.95■■□□□ 1.26
CSPG5-205ENST00000610462 CTSZQ9UBR2 303 aa22.95■■□□□ 1.26
CSPG5-205ENST00000610462 IGHV1-69-2A0A0G2JMI3 117 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 OR10G9Q8NGN4 311 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 OR10G7Q8NGN6 311 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 LHX4Q969G2 390 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 CTXND1A0A1B0GTU2 59 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 DVL1O14640 695 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 IFNA1P01562 189 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 ABHD12Q8N2K0 398 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 OR13D1Q8NGV5 346 aa22.94■■□□□ 1.26
CSPG5-205ENST00000610462 PRSS46E5RG02 174 aa22.93■■□□□ 1.26
CSPG5-205ENST00000610462 IL6RP08887 468 aaPredicted RBP22.93■■□□□ 1.26
CSPG5-205ENST00000610462 ZFP82Q8N141 532 aa22.93■■□□□ 1.26
CSPG5-205ENST00000610462 RAB11AP62491 216 aa22.93■■□□□ 1.26
CSPG5-205ENST00000610462 C2CD4CQ8TF44 421 aa22.93■■□□□ 1.26
CSPG5-205ENST00000610462 TMEM170AQ8WVE7 144 aa22.93■■□□□ 1.26
CSPG5-205ENST00000610462 GRNP28799 593 aaKnown RBP22.92■■□□□ 1.26
CSPG5-205ENST00000610462 Q8N7P7 452 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 HIST1H2BAQ96A08 127 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 RAB39BQ96DA2 213 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 P2RX4Q99571 388 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 ACTR3CQ9C0K3 210 aaPredicted RBP22.92■■□□□ 1.26
CSPG5-205ENST00000610462 SLC25A22Q9H936 323 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 VAX2Q9UIW0 290 aa22.92■■□□□ 1.26
CSPG5-205ENST00000610462 LOXP28300 417 aaPredicted RBP22.91■■□□□ 1.26
CSPG5-205ENST00000610462 RPL35P42766 123 aaKnown RBP22.91■■□□□ 1.26
CSPG5-205ENST00000610462 AKR1D1P51857 326 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 PRNDQ9UKY0 176 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 PKDREJQ9NTG1 2253 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 MPDU1O75352 247 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 EIF3GO75821 320 aaKnown RBP eCLIP22.91■■□□□ 1.26
CSPG5-205ENST00000610462 DLK1P80370 383 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 CA5BP1Q8WTZ4 195 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 OR51B2Q9Y5P1 312 aa22.91■■□□□ 1.26
CSPG5-205ENST00000610462 UPK2O00526 184 aa22.9■■□□□ 1.26
CSPG5-205ENST00000610462 IGKV1-16P04430 117 aa22.9■■□□□ 1.26
CSPG5-205ENST00000610462 TVP23CQ96ET8 276 aa22.9■■□□□ 1.26
CSPG5-205ENST00000610462 NIPSNAP3BQ9BS92 247 aa22.9■■□□□ 1.26
CSPG5-205ENST00000610462 ENY2Q9NPA8 101 aa22.9■■□□□ 1.26
CSPG5-205ENST00000610462 PLA2G5P39877 138 aa22.89■■□□□ 1.26
CSPG5-205ENST00000610462 RAB5BP61020 215 aa22.89■■□□□ 1.26
CSPG5-205ENST00000610462 RBMS3Q6XE24 437 aaKnown RBP22.89■■□□□ 1.26
CSPG5-205ENST00000610462 C8orf31Q8N9H6 132 aa22.89■■□□□ 1.26
CSPG5-205ENST00000610462 MRPL20Q9BYC9 149 aaKnown RBP22.89■■□□□ 1.26
CSPG5-205ENST00000610462 SOX15O60248 233 aa22.89■■□□□ 1.25
CSPG5-205ENST00000610462 ADORA2A-AS1P86434 159 aa22.89■■□□□ 1.25
CSPG5-205ENST00000610462 HABP2Q14520 560 aaPredicted RBP22.89■■□□□ 1.25
CSPG5-205ENST00000610462 ACOT6Q3I5F7 207 aaPredicted RBP22.89■■□□□ 1.25
CSPG5-205ENST00000610462 FAM90A2PQ658T7 463 aa22.89■■□□□ 1.25
CSPG5-205ENST00000610462 ZNF596Q8TC21 504 aa22.89■■□□□ 1.25
CSPG5-205ENST00000610462 ZNF257Q9Y2Q1 563 aa22.89■■□□□ 1.25
CSPG5-205ENST00000610462 SMCO3A2RU48 225 aa22.88■■□□□ 1.25
CSPG5-205ENST00000610462 SRRM4A7MD48 611 aaKnown RBP22.88■■□□□ 1.25
CSPG5-205ENST00000610462 CYB5BO43169 146 aa22.88■■□□□ 1.25
CSPG5-205ENST00000610462 SIAH2O43255 324 aa22.88■■□□□ 1.25
CSPG5-205ENST00000610462 IFNA4P05014 189 aa22.88■■□□□ 1.25
CSPG5-205ENST00000610462 DLX6P56179 175 aa22.88■■□□□ 1.25
CSPG5-205ENST00000610462 TREML4Q6UXN2 200 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms