RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 ZNF701M0R085 212 aaPredicted RBP14.4□□□□□ -0.1
PNKP-213ENST00000599543 CD3DP04234 171 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 RTL8BQ17RB0 113 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 KCTD9Q7L273 389 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 TCTEX1D2Q8WW35 142 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 DDB2Q92466 427 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 RSRP1Q9BUV0 290 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 RANGRFQ9HD47 186 aaPredicted RBP14.4□□□□□ -0.1
PNKP-213ENST00000599543 MTFP1Q9UDX5 166 aa14.4□□□□□ -0.1
PNKP-213ENST00000599543 TNCP24821 2201 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 A0A0G2JLM5 398 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 SHOXO15266 292 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 FCGR3BO75015 233 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 CRYZL1O95825 349 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 IGLV2-23P01705 113 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 ZP3P21754 424 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 TSPAN5P62079 268 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 TAGLNQ01995 201 aaKnown RBP14.39□□□□□ -0.11
PNKP-213ENST00000599543 PJVKQ0ZLH3 352 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 FAAP20Q6NZ36 180 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 ZNF818PQ6ZRF7 136 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 SBSPONQ8IVN8 264 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 OR5T1Q8NG75 326 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 OR4D10Q8NGI6 311 aa14.39□□□□□ -0.11
PNKP-213ENST00000599543 DGCR14Q96DF8 476 aaKnown RBP14.39□□□□□ -0.11
PNKP-213ENST00000599543 FABP12A6NFH5 140 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 SRRM4A7MD48 611 aaKnown RBP14.38□□□□□ -0.11
PNKP-213ENST00000599543 C3orf84H3BNL1 204 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 GABARAPH6UMI1 98 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 FRMD6-AS1P0C7T7 363 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 SSBP2P81877 361 aaPredicted RBP14.38□□□□□ -0.11
PNKP-213ENST00000599543 EIF4EBP1Q13541 118 aaPredicted RBP14.38□□□□□ -0.11
PNKP-213ENST00000599543 DHRS11Q6UWP2 260 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 OR6F1Q8NGZ6 308 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 MOB3AQ96BX8 217 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 TMEM68Q96MH6 324 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 RCHY1Q96PM5 261 aa14.38□□□□□ -0.11
PNKP-213ENST00000599543 RRASP10301 218 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 TMEM177Q53S58 311 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 RNASE10Q5GAN6 216 aaKnown RBP14.37□□□□□ -0.11
PNKP-213ENST00000599543 HAPLN4Q86UW8 402 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 MFSD4AQ8N468 514 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 SMIM4Q8WVI0 70 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 ADTRPQ96IZ2 230 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 PHB2Q99623 299 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 SOSTQ9BQB4 213 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 DNAH7Q8WXX0 4024 aa14.37□□□□□ -0.11
PNKP-213ENST00000599543 ANKRD34BA5PLL1 514 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 SLC22A5O76082 557 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 CRYGBP07316 175 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 GNRHRP30968 328 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 BRWD1-AS2P59051 145 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 IDO2Q6ZQW0 420 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 OR51H1Q8NH63 302 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 C15orf40Q8WUR7 153 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 ZMAT4Q9H898 229 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 COA4Q9NYJ1 87 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 V9GYH0 126 aa14.36□□□□□ -0.11
PNKP-213ENST00000599543 TPPPO94811 219 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 RAB3DO95716 219 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 S100A5P33763 92 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 VMA21Q3ZAQ7 101 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 PYDC2Q56P42 97 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 VKORC1L1Q8N0U8 176 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 TMEM229BQ8NBD8 167 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 HSD17B10Q99714 261 aaKnown RBP14.35□□□□□ -0.11
PNKP-213ENST00000599543 NDUFA13Q9P0J0 144 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 PRELID3BQ9Y3B1 194 aa14.35□□□□□ -0.11
PNKP-213ENST00000599543 CTDSPLO15194 276 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 IGLV1-51P01701 117 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 RLN1P04808 185 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 IFNA6P05013 189 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 APELAP0DMC3 54 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 PPP5CP53041 499 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 MRPS10P82664 201 aaKnown RBP14.34□□□□□ -0.11
PNKP-213ENST00000599543 DEFA5Q01523 94 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 STEAP1BQ6NZ63 245 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 MUC7Q8TAX7 377 aa14.34□□□□□ -0.11
PNKP-213ENST00000599543 MPPED1O15442 326 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 BRI3O95415 125 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 PI3P19957 117 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 TAS2R19P59542 299 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 UBE2KP61086 200 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 ZNF79Q15937 498 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 TNXAQ16473 311 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 SCGB2B2Q4G0G5 96 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 AADACL3Q5VUY0 350 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 ZNF66Q6ZN08 573 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 CCDC190Q86UF4 302 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 SPAG16Q8N0X2 631 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 OR9G4Q8NGQ1 327 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 USMG5Q96IX5 58 aa14.33□□□□□ -0.12
PNKP-213ENST00000599543 MSGN1A6NI15 193 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 GSTZ1O43708 216 aaPredicted RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 PGLYRP1O75594 196 aaPredicted RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 CD74P04233 296 aa14.32□□□□□ -0.12
PNKP-213ENST00000599543 SAA1P0DJI8 122 aaPredicted RBP14.32□□□□□ -0.12
PNKP-213ENST00000599543 IGHV4-30-4P0DP06 118 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms