RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 KCNAB3O43448 404 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 ACTL6BO94805 426 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 CA2P00918 260 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 HKR1P10072 659 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 MECP2P51608 486 aaKnown RBP10.8□□□□□ -0.68
VMP1-203ENST00000586245 GNB1P62873 340 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 DHRS2Q13268 280 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 PRSS8Q16651 343 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 H2BFWTQ7Z2G1 175 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 SLC35E3Q7Z769 313 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 MMD2Q8IY49 270 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 SELENOHQ8IZQ5 122 aaKnown RBP10.8□□□□□ -0.68
VMP1-203ENST00000586245 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.8□□□□□ -0.68
VMP1-203ENST00000586245 OR4F5Q8NH21 305 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 COQ8AQ8NI60 647 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 SEC22AQ96IW7 307 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 TMEM56Q96MV1 263 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 PRR13Q9NZ81 148 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
VMP1-203ENST00000586245 FCN1O00602 326 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 SNAPC5O75971 98 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 CNIH1O95406 144 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 DUS4LO95620 317 aaKnown RBP10.79□□□□□ -0.68
VMP1-203ENST00000586245 DHFRP00374 187 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 IGHG2P01859 326 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 VDAC2P45880 294 aaPredicted RBP10.79□□□□□ -0.68
VMP1-203ENST00000586245 CX3CL1P78423 397 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 RELBQ01201 579 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 TNXAQ16473 311 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 ANKRD55Q3KP44 614 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 ZNF562Q6V9R5 426 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 CADM3Q8N126 398 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 Q8N2B8 174 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 LHFPL5Q8TAF8 219 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 ABHD5Q8WTS1 349 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 TAF15Q92804 592 aaKnown RBP eCLIP10.79□□□□□ -0.68
VMP1-203ENST00000586245 HSPB9Q9BQS6 159 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 MARVELD1Q9BSK0 173 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 C16orf95Q9H693 158 aa10.79□□□□□ -0.68
VMP1-203ENST00000586245 ZNF430Q9H8G1 570 aaPredicted RBP10.79□□□□□ -0.68
VMP1-203ENST00000586245 IGHV7-81A0A0B4J1V7 117 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 A0A0B4J2A0 478 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 DUXBA0A1W2PPF3 345 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 UPK2O00526 184 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 PRAF2O60831 178 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 IGKV1-5P01602 117 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 IL5P05113 134 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 SPNP16150 400 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 MAS1LP35410 378 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 RPL8P62917 257 aaKnown RBP10.78□□□□□ -0.68
VMP1-203ENST00000586245 PJVKQ0ZLH3 352 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 FXYD3Q14802 87 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 KRTAP24-1Q3LI83 254 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 Q6ZS46 218 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 FOXRED2Q8IWF2 684 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 SLC35G3Q8N808 338 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 LRTM2Q8N967 370 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 OR52B4Q8NGK2 314 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 ZNF431Q8TF32 576 aaPredicted RBP10.78□□□□□ -0.68
VMP1-203ENST00000586245 TMEM158Q8WZ71 300 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 PHB2Q99623 299 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 SEC22CQ9BRL7 303 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 OR51J1Q9H342 316 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 GPN1Q9HCN4 374 aaPredicted RBP10.78□□□□□ -0.68
VMP1-203ENST00000586245 PARP11Q9NR21 331 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 SHPKQ9UHJ6 478 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 MMP24Q9Y5R2 645 aa10.78□□□□□ -0.68
VMP1-203ENST00000586245 A0A1B0GUS0 222 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 RBMXL2O75526 392 aaKnown RBP10.77□□□□□ -0.69
VMP1-203ENST00000586245 FGF2P09038 288 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 HLA-GP17693 338 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 VDAC1P21796 283 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 FOXL1Q12952 345 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 LYZL2Q7Z4W2 148 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 OR4A16Q8NH70 328 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 GRPEL2Q8TAA5 225 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 ARPC1AQ92747 370 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 LSM10Q969L4 123 aaKnown RBP10.77□□□□□ -0.69
VMP1-203ENST00000586245 FKBP11Q9NYL4 201 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 PRNDQ9UKY0 176 aa10.77□□□□□ -0.69
VMP1-203ENST00000586245 TRAV3A0A0B4J244 114 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 CLPSL1A2RUU4 121 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 AP4M1O00189 453 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 IL6RP08887 468 aaPredicted RBP10.76□□□□□ -0.69
VMP1-203ENST00000586245 OR9G9P0C7N8 305 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 MRGPRG-AS1Q2M3A8 158 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 LINC01006Q8NI28 216 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 MITD1Q8WV92 249 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 C19orf24Q9BVV8 132 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 COMMD5Q9GZQ3 224 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 NSG2Q9Y328 171 aa10.76□□□□□ -0.69
VMP1-203ENST00000586245 C2CD3Q4AC94 2353 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 A0A0G2JRQ6 117 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 TMEM89A2RUT3 159 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 C15orf61A6NNL5 157 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 IFNA21P01568 189 aa10.75□□□□□ -0.69
VMP1-203ENST00000586245 HOXB5P09067 269 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms