RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 PARP11Q9NR21 331 aa12.28□□□□□ -0.44
SLC6A4-205ENST00000579221 LINC00527Q9UJ94 153 aa12.28□□□□□ -0.44
SLC6A4-205ENST00000579221 MARCH11A6NNE9 402 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 OR5AC1P0C628 307 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 ANXA3P12429 323 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 VDAC1P21796 283 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 MAS1LP35410 378 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 G6PCP35575 357 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 SLC35B1P78383 322 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 IFITM3Q01628 133 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM267Q0VDI3 215 aaPredicted RBP12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TNXAQ16473 311 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM128Q5BJH2 165 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 OR4A47Q6IF82 309 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 SLC25A42Q86VD7 318 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 SPATA3Q8NHX4 192 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 GALNT14Q96FL9 552 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM222Q9H0R3 208 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 ZNF430Q9H8G1 570 aaPredicted RBP12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM140Q9NV12 185 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 ZNF580Q9UK33 172 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 TBC1D24Q9ULP9 559 aa12.27□□□□□ -0.45
SLC6A4-205ENST00000579221 FBN1P35555 2871 aaKnown RBP12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 FAM240BA0A1B0GVZ2 78 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 PSMB11A5LHX3 300 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 UPK2O00526 184 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 ARPC1BO15143 372 aaKnown RBP12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 ATP6V0E1O15342 81 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 SNAPC5O75971 98 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 IGKV1-39P01597 117 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 IGKV1D-39P04432 117 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 IL6RP08887 468 aaPredicted RBP12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 SLC6A1P30531 599 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 DEFA1P59665 94 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 DEFA3P59666 94 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 UBE2MP61081 183 aaKnown RBP12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 MRGPRG-AS1Q2M3A8 158 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 H2BFWTQ7Z2G1 175 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 ZNF695Q8IW36 515 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 OR5AU1Q8NGC0 362 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 SGMS2Q8NHU3 365 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 GLYATL2Q8WU03 294 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 WFDC12Q8WWY7 111 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 ARPC1AQ92747 370 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
SLC6A4-205ENST00000579221 TRAV41A0A0B4J266 112 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 PIGBOS1A0A0B4J2F0 54 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 CDS2O95674 445 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 TCRBP04435 133 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 EGR2P11161 476 aaPredicted RBP12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 CRIP2P52943 208 aaPredicted RBP12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 RPL8P62917 257 aaKnown RBP12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM187Q14656 261 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 GRPEL2Q8TAA5 225 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 SEC22AQ96IW7 307 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM68Q96MH6 324 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 FLVCR2Q9UPI3 526 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 WSB1Q9Y6I7 421 aa12.25□□□□□ -0.45
SLC6A4-205ENST00000579221 MSGN1A6NI15 193 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 SFT2D2O95562 160 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 FGF2P09038 288 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 HLA-GP17693 338 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 VAMP1P23763 118 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 UNQ5815/PRO19632Q6UWF5 114 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 SHISA2Q6UWI4 295 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 ZNF329Q86UD4 541 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 SELENOHQ8IZQ5 122 aaKnown RBP12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 LGI3Q8N145 548 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 COMMD1Q8N668 190 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 OR4X2Q8NGF9 303 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 RBPMSQ93062 196 aaKnown RBP12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 IL22RA2Q969J5 263 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 RRNAD1Q96FB5 475 aaKnown RBP12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 PHB2Q99623 299 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 FAM103A1Q9BTL3 118 aaKnown RBP12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 FKBP11Q9NYL4 201 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM56-RWDD3S4R434 201 aa12.24□□□□□ -0.45
SLC6A4-205ENST00000579221 TRAV3A0A0B4J244 114 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 G3V318 75 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 FBXO24O75426 580 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 RPL27AP46776 148 aaKnown RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 AKR1C2P52895 323 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 KRTAP10-3P60369 221 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 SRPXP78539 464 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 SSBP2P81877 361 aaPredicted RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 NDPQ00604 133 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 TEX38Q6PEX7 206 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 LFNGQ8NES3 379 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 OR4A16Q8NH70 328 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 RNASE11Q8TAA1 199 aaKnown RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 ENKURQ8TC29 256 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 WIPF2Q8TF74 440 aaPredicted RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 SRSF12Q8WXF0 261 aaKnown RBP12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 SPIN2AQ99865 258 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 SPIN2BQ9BPZ2 258 aa12.23□□□□□ -0.45
SLC6A4-205ENST00000579221 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms