RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 BMPR1BO00238 502 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 NEURL1O76050 574 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 FOXG1P55316 489 aaPredicted RBP12.01□□□□□ -0.49
SMG6-215ENST00000574501 ARF1P84077 181 aaKnown RBP12.01□□□□□ -0.49
SMG6-215ENST00000574501 RELBQ01201 579 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 TREML4Q6UXN2 200 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 ZNF576Q9H609 170 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 NXPH1P58417 271 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 B3GALT5-AS1P59052 145 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 PCOLCEQ15113 449 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 VASH2Q86V25 355 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 OR52L2PQ8NGH6 319 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 KCNE4Q8WWG9 221 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 MGST2Q99735 147 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 TXNDC17Q9BRA2 123 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 GSX1Q9H4S2 264 aaPredicted RBP12.01□□□□□ -0.49
SMG6-215ENST00000574501 SEPSECSQ9HD40 501 aaKnown RBP12.01□□□□□ -0.49
SMG6-215ENST00000574501 MED12LQ86YW9 2145 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 BRWD1Q9NSI6 2320 aa12.01□□□□□ -0.49
SMG6-215ENST00000574501 IGLC7A0M8Q6 106 aa12□□□□□ -0.49
SMG6-215ENST00000574501 GCHFRP30047 84 aa12□□□□□ -0.49
SMG6-215ENST00000574501 OTX2P32243 289 aa12□□□□□ -0.49
SMG6-215ENST00000574501 CX3CL1P78423 397 aa12□□□□□ -0.49
SMG6-215ENST00000574501 Q56UQ5 140 aa12□□□□□ -0.49
SMG6-215ENST00000574501 LDLRAD2Q5SZI1 272 aa12□□□□□ -0.49
SMG6-215ENST00000574501 SPATA46Q5T0L3 261 aa12□□□□□ -0.49
SMG6-215ENST00000574501 RIPPLY2Q5TAB7 128 aa12□□□□□ -0.49
SMG6-215ENST00000574501 ASPHD1Q5U4P2 390 aa12□□□□□ -0.49
SMG6-215ENST00000574501 TSTD1Q8NFU3 115 aa12□□□□□ -0.49
SMG6-215ENST00000574501 OR2D3Q8NGH3 330 aa12□□□□□ -0.49
SMG6-215ENST00000574501 RAC2P15153 192 aa12□□□□□ -0.49
SMG6-215ENST00000574501 GNG3P63215 75 aa12□□□□□ -0.49
SMG6-215ENST00000574501 OR4F17Q8NGA8 305 aa12□□□□□ -0.49
SMG6-215ENST00000574501 ST6GALNAC6Q969X2 333 aa12□□□□□ -0.49
SMG6-215ENST00000574501 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
SMG6-215ENST00000574501 RARRES3Q9UL19 164 aa12□□□□□ -0.49
SMG6-215ENST00000574501 ANKRD30BLA7E2S9 258 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 RFPL3SP0C7P2 107 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 IGLL1P15814 213 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 OPRK1P41145 380 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 CEBPDP49716 269 aaPredicted RBP11.99□□□□□ -0.49
SMG6-215ENST00000574501 SSR4P51571 173 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 WDR73Q6P4I2 378 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 PQLC2Q6ZP29 291 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 MOB1BQ7L9L4 216 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 ZNF439Q8NDP4 499 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 IFI44Q8TCB0 444 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 MRGPRDQ8TDS7 321 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 GGTLC1Q9BX51 225 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 CDC42EP3Q9UKI2 254 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 DMDP11532 3685 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 LOC102724200A0A096LPH7 203 aaPredicted RBP11.99□□□□□ -0.49
SMG6-215ENST00000574501 IGHV1-69-2A0A0G2JMI3 117 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 RAB29O14966 203 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 SRD5A2P31213 254 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 WIPI1Q5MNZ9 446 aaPredicted RBP11.99□□□□□ -0.49
SMG6-215ENST00000574501 NCKAP5O14513 1909 aa11.99□□□□□ -0.49
SMG6-215ENST00000574501 DOCK7Q96N67 2140 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 TRGV10A0A0A0MS01 117 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 LINC00473A8K010 186 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 CGAP01215 116 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 MT-ND6P03923 174 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 GNG4P50150 75 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 FSCN3Q9NQT6 498 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 TNRC6AQ8NDV7 1962 aaKnown RBP11.98□□□□□ -0.49
SMG6-215ENST00000574501 A0A1W2PN81 502 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 C9JCJ5 164 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 CA1P00915 261 aaPredicted RBP11.98□□□□□ -0.49
SMG6-215ENST00000574501 PPBPP02775 128 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 OR9G9P0C7N8 305 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 CRYBB3P26998 211 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 CATR1Q13166 79 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 VHLLQ6RSH7 139 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 C19orf35Q6ZS72 473 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 KMT2EQ8IZD2 1858 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 POM121L2Q96KW2 1035 aa11.98□□□□□ -0.49
SMG6-215ENST00000574501 TRAV30A0A087WSZ9 112 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 TRAV9-2A0A087WT02 112 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 HELTA6NFD8 242 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 DNPH1O43598 174 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 MRPL33O75394 65 aaKnown RBP11.97□□□□□ -0.49
SMG6-215ENST00000574501 PSG1P11464 419 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 CLDN18P56856 261 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 HOXA4Q00056 320 aaPredicted RBP11.97□□□□□ -0.49
SMG6-215ENST00000574501 TNXAQ16473 311 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 EBLN2Q6P2I7 272 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 MUC15Q8N387 334 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 OR4P4Q8NGL7 312 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 NEUROG1Q92886 237 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 SERTAD4Q9NUC0 356 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 MBNL3Q9NUK0 354 aaKnown RBP11.97□□□□□ -0.49
SMG6-215ENST00000574501 APCSP02743 223 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 AMY1AP04745 511 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 SLAQ13239 276 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 EIF4EBP1Q13541 118 aaPredicted RBP11.97□□□□□ -0.49
SMG6-215ENST00000574501 EFNB3Q15768 340 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 PMCHL1Q16048 86 aa11.97□□□□□ -0.49
SMG6-215ENST00000574501 OR5B3Q8NH48 314 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms