RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 GDPD1Q8N9F7 314 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 GRPEL2Q8TAA5 225 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 MARCH1Q8TCQ1 289 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 MYOZ3Q8TDC0 251 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 BATF3Q9NR55 127 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 ZFP57Q9NU63 452 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 BET1LQ9NYM9 111 aa13.16□□□□□ -0.3
RPL28-209ENST00000560055 MPPED1O15442 326 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 SOX15O60248 233 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 CREBL2O60519 120 aaPredicted RBP13.15□□□□□ -0.3
RPL28-209ENST00000560055 CNIH1O95406 144 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 CTSDP07339 412 aaPredicted RBP13.15□□□□□ -0.3
RPL28-209ENST00000560055 AP3S2P59780 193 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 RPL23AP62750 156 aaKnown RBP13.15□□□□□ -0.3
RPL28-209ENST00000560055 TMEM267Q0VDI3 215 aaPredicted RBP13.15□□□□□ -0.3
RPL28-209ENST00000560055 BAK1Q16611 211 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 ASPHD1Q5U4P2 390 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 OR4A47Q6IF82 309 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 LINC00299Q6ZSB3 139 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 MMD2Q8IY49 270 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 TOMM5Q8N4H5 51 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 LFNGQ8NES3 379 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 ZFAND1Q8TCF1 268 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 ABHD5Q8WTS1 349 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 HRASLSQ9HDD0 168 aa13.15□□□□□ -0.3
RPL28-209ENST00000560055 FOXA2Q9Y261 457 aaPredicted RBP13.15□□□□□ -0.3
RPL28-209ENST00000560055 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
RPL28-209ENST00000560055 ZNF45Q02386 682 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 TNXAQ16473 311 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 CXorf66Q5JRM2 361 aaPredicted RBP13.14□□□□□ -0.31
RPL28-209ENST00000560055 UNQ5815/PRO19632Q6UWF5 114 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 TREML4Q6UXN2 200 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 LCNL1Q6ZST4 164 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 SSX9Q7RTT3 188 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 CADM3Q8N126 398 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 OR4A5Q8NH83 315 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 RTBDNQ9BSG5 229 aaPredicted RBP13.14□□□□□ -0.31
RPL28-209ENST00000560055 KLK15Q9H2R5 256 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 MCUBQ9NWR8 336 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 GPR132Q9UNW8 380 aa13.14□□□□□ -0.31
RPL28-209ENST00000560055 DNAH3Q8TD57 4116 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 A0A1W2PN81 502 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 A0A1W2PRX2 142 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 MARCH11A6NNE9 402 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 FGF2P09038 288 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 FAUP35544 74 aaKnown RBP13.13□□□□□ -0.31
RPL28-209ENST00000560055 CHRNA7P36544 502 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 LPAR6P43657 344 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
RPL28-209ENST00000560055 KHDC1LQ5JSQ8 128 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 C18orf65Q6ZTR6 163 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 OR5M8Q8NGP6 311 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 SRSF12Q8WXF0 261 aaKnown RBP13.13□□□□□ -0.31
RPL28-209ENST00000560055 R3HDM4Q96D70 268 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 TMEM68Q96MH6 324 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 AKIP1Q9NQ31 210 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
RPL28-209ENST00000560055 MSGN1A6NI15 193 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 H0Y980 276 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 IGKV1-39P01597 117 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 IGKV1D-39P04432 117 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 SLC6A1P30531 599 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 MAS1LP35410 378 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 CDX1P47902 265 aaPredicted RBP13.12□□□□□ -0.31
RPL28-209ENST00000560055 RPL8P62917 257 aaKnown RBP13.12□□□□□ -0.31
RPL28-209ENST00000560055 C10orf55Q5SWW7 151 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 CCDC71LQ8N9Z2 235 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 OR4F17Q8NGA8 305 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 OR4F4Q96R69 305 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 TP53RKQ96S44 253 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 PTTG2Q9NZH5 202 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 COPZ2Q9P299 210 aa13.12□□□□□ -0.31
RPL28-209ENST00000560055 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 A0A1B0GW64 132 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 E7EUB6 86 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 UPK2O00526 184 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 ACTL6BO94805 426 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 HLA-GP17693 338 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 RAB9AP51151 201 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 DMBX1Q8NFW5 382 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 FAM110DQ8TAY7 271 aaPredicted RBP13.11□□□□□ -0.31
RPL28-209ENST00000560055 C14orf166Q9Y224 244 aaKnown RBP13.11□□□□□ -0.31
RPL28-209ENST00000560055 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
RPL28-209ENST00000560055 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 TEX22C9J3V5 150 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 BRI3O95415 125 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 KRASP01116 189 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 PF4V1P10720 104 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 RPA2P15927 270 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 G6PCP35575 357 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 ERVK-16P61578 105 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 TRIQKQ629K1 86 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 ETV3LQ6ZN32 361 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 ZNF695Q8IW36 515 aa13.1□□□□□ -0.31
RPL28-209ENST00000560055 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms