RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 VSTM2AQ8TAG5 236 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 TMEM167AQ8TBQ9 72 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 ZFAND1Q8TCF1 268 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 ZNF486Q96H40 463 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-206ENST00000558471 SDHCQ99643 169 aaPredicted RBP9.77□□□□□ -0.85
LRRC28-206ENST00000558471 PRRT1Q99946 306 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 KLK15Q9H2R5 256 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 HRASLSQ9HDD0 168 aa9.77□□□□□ -0.85
LRRC28-206ENST00000558471 A0A1W2PN81 502 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 MSGN1A6NI15 193 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 CTSDP07339 412 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 IL6RP08887 468 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 RPA2P15927 270 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 NQO2P16083 231 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 CHRNA7P36544 502 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 RPL23AP62750 156 aaKnown RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 OR4A47Q6IF82 309 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 C18orf65Q6ZTR6 163 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 GDPD1Q8N9F7 314 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 R3HDM4Q96D70 268 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 AIFM2Q9BRQ8 373 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 RTBDNQ9BSG5 229 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 BATF3Q9NR55 127 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 ZFP57Q9NU63 452 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 MCUBQ9NWR8 336 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 SLC2A8Q9NY64 477 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 BET1LQ9NYM9 111 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 COMMD9Q9P000 198 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 GPR132Q9UNW8 380 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 FOXA2Q9Y261 457 aaPredicted RBP9.76□□□□□ -0.85
LRRC28-206ENST00000558471 PKD1L1Q8TDX9 2849 aa9.76□□□□□ -0.85
LRRC28-206ENST00000558471 VWFP04275 2813 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 CREBL2O60519 120 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-206ENST00000558471 ACTL6BO94805 426 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 KRASP01116 189 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 PF4V1P10720 104 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 ECI1P42126 302 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 AP3S2P59780 193 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 ZNF45Q02386 682 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-206ENST00000558471 SURF2Q15527 256 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-206ENST00000558471 C10orf55Q5SWW7 151 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 ASPHD1Q5U4P2 390 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 DMBX1Q8NFW5 382 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 OR5T1Q8NG75 326 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 OR4A5Q8NH83 315 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 CASTOR1Q8WTX7 329 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 SRSF12Q8WXF0 261 aaKnown RBP9.75□□□□□ -0.85
LRRC28-206ENST00000558471 C5orf66Q9H5L9 145 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 FAM212BQ9NTI7 297 aaPredicted RBP9.75□□□□□ -0.85
LRRC28-206ENST00000558471 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 COPZ2Q9P299 210 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 SCP2D1Q9UJQ7 156 aa9.75□□□□□ -0.85
LRRC28-206ENST00000558471 MARCH11A6NNE9 402 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 E7EUB6 86 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 UPK2O00526 184 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 IGKV1-39P01597 117 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 IGKV1D-39P04432 117 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 APELAP0DMC3 54 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 MYOD1P15172 320 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 FAUP35544 74 aaKnown RBP9.74□□□□□ -0.85
LRRC28-206ENST00000558471 G6PCP35575 357 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 CDX1P47902 265 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-206ENST00000558471 RAB9AP51151 201 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 RPL8P62917 257 aaKnown RBP9.74□□□□□ -0.85
LRRC28-206ENST00000558471 ZNF57Q68EA5 555 aaPredicted RBP9.74□□□□□ -0.85
LRRC28-206ENST00000558471 TMEM65Q6PI78 240 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 CCDC71LQ8N9Z2 235 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 OR4F17Q8NGA8 305 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 OR5M8Q8NGP6 311 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 MYOZ3Q8TDC0 251 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 TMEM68Q96MH6 324 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 OR4F4Q96R69 305 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 TP53RKQ96S44 253 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 PHB2Q99623 299 aa9.74□□□□□ -0.85
LRRC28-206ENST00000558471 C14orf166Q9Y224 244 aaKnown RBP9.74□□□□□ -0.85
LRRC28-206ENST00000558471 C3orf85A0A1B0GTC6 90 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 A0A1B0GW64 132 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 NUDT19A8MXV4 375 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 H0Y980 276 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 HLA-GP17693 338 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 MAS1LP35410 378 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 ERVK-16P61578 105 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 SP6Q3SY56 376 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 TRIQKQ629K1 86 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 LINC00299Q6ZSB3 139 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 C8orf86Q6ZUL3 223 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 ZNF695Q8IW36 515 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 KLHL30-AS1Q8NEE0 82 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 DEDD2Q8WXF8 326 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 MS4A10Q96PG2 267 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 AKIP1Q9NQ31 210 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 VSIG4Q9Y279 399 aa9.73□□□□□ -0.85
LRRC28-206ENST00000558471 HMX3A6NHT5 357 aa9.72□□□□□ -0.85
LRRC28-206ENST00000558471 CGB1A6NKQ9 187 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms