RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 LINC01006Q8NI28 216 aa16.67■□□□□ 0.26
CACNB3-210ENST00000548874 TMEM158Q8WZ71 300 aa16.67■□□□□ 0.26
CACNB3-210ENST00000548874 C19orf24Q9BVV8 132 aa16.67■□□□□ 0.26
CACNB3-210ENST00000548874 SERTAD4Q9NUC0 356 aa16.67■□□□□ 0.26
CACNB3-210ENST00000548874 TMEM140Q9NV12 185 aa16.67■□□□□ 0.26
CACNB3-210ENST00000548874 CA2P00918 260 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 IGKV1-5P01602 117 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 OR4E1P0C645 316 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 P0C879 139 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 CX3CL1P78423 397 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 ZNF562Q6V9R5 426 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 SLC35E3Q7Z769 313 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 SELENOHQ8IZQ5 122 aaKnown RBP16.66■□□□□ 0.26
CACNB3-210ENST00000548874 RBPMSQ93062 196 aaKnown RBP16.66■□□□□ 0.26
CACNB3-210ENST00000548874 IL22RA2Q969J5 263 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 CLCC1Q96S66 551 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 ZNF430Q9H8G1 570 aaPredicted RBP16.66■□□□□ 0.26
CACNB3-210ENST00000548874 PRR13Q9NZ81 148 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 MMP24Q9Y5R2 645 aa16.66■□□□□ 0.26
CACNB3-210ENST00000548874 C9orf170A2RU37 121 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 LINC01548A6NM66 108 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 UPK2O00526 184 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 KCNAB3O43448 404 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 CREBL2O60519 120 aaPredicted RBP16.65■□□□□ 0.26
CACNB3-210ENST00000548874 PTTG1O95997 202 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 SRPXP78539 464 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 NDPQ00604 133 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 DHRS2Q13268 280 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 TMEM95Q3KNT9 176 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 LYG2Q86SG7 212 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 MMD2Q8IY49 270 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 OR51J1Q9H342 316 aa16.65■□□□□ 0.26
CACNB3-210ENST00000548874 TRAV3A0A0B4J244 114 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 CLPSL1A2RUU4 121 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 ATG12O94817 140 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 HLA-AP01891 365 aaKnown RBP16.64■□□□□ 0.25
CACNB3-210ENST00000548874 FGF2P09038 288 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 MDKP21741 143 aaPredicted RBP16.64■□□□□ 0.25
CACNB3-210ENST00000548874 FOXL1Q12952 345 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 ANKRD55Q3KP44 614 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 TMEM268Q5VZI3 342 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 PLET1Q6UQ28 207 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 ZNF695Q8IW36 515 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 LGI3Q8N145 548 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 LRTM2Q8N967 370 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 MARVELD1Q9BSK0 173 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 BEX1Q9HBH7 125 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 ZNF580Q9UK33 172 aa16.64■□□□□ 0.25
CACNB3-210ENST00000548874 A0A1B0GUS0 222 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 IGF1P05019 195 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 SPNP16150 400 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 VDAC2P45880 294 aaPredicted RBP16.63■□□□□ 0.25
CACNB3-210ENST00000548874 C4orf46Q504U0 113 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 CASTOR1Q8WTX7 329 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 WNT10AQ9GZT5 417 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 PLXNB1O43157 2135 aa16.63■□□□□ 0.25
CACNB3-210ENST00000548874 TNCP24821 2201 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 A0A0B4J2A0 478 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 A0A0G2JRQ6 117 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 AP4M1O00189 453 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 ATP6V0E1O15342 81 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 DUS4LO95620 317 aaKnown RBP16.62■□□□□ 0.25
CACNB3-210ENST00000548874 OR9G9P0C7N8 305 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 EGR2P11161 476 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-210ENST00000548874 MAS1LP35410 378 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 AKR1C2P52895 323 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 RAB25P57735 213 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 RPL8P62917 257 aaKnown RBP16.62■□□□□ 0.25
CACNB3-210ENST00000548874 FXYD3Q14802 87 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 ARSJQ5FYB0 599 aaPredicted RBP16.62■□□□□ 0.25
CACNB3-210ENST00000548874 H2BFWTQ7Z2G1 175 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 FOXRED2Q8IWF2 684 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 SLC35G3Q8N808 338 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 SHPKQ9UHJ6 478 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 FBXO7Q9Y3I1 522 aa16.62■□□□□ 0.25
CACNB3-210ENST00000548874 FBN1P35555 2871 aaKnown RBP16.62■□□□□ 0.25
CACNB3-210ENST00000548874 IL5P05113 134 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 HLA-GP17693 338 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 COMPP49747 757 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-210ENST00000548874 CRIP2P52943 208 aaPredicted RBP16.61■□□□□ 0.25
CACNB3-210ENST00000548874 PROK1P58294 105 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 TNXAQ16473 311 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 FAM219AQ8IW50 185 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 OR52B4Q8NGK2 314 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 ARPC1AQ92747 370 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 LSM10Q969L4 123 aaKnown RBP16.61■□□□□ 0.25
CACNB3-210ENST00000548874 PARP11Q9NR21 331 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 RNF114Q9Y508 228 aa16.61■□□□□ 0.25
CACNB3-210ENST00000548874 PIGBOS1A0A0B4J2F0 54 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 DUXBA0A1W2PPF3 345 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 INMT-MINDY4F8WBC2 141 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 GNB1P62873 340 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 IZUMO4Q1ZYL8 232 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 KRTAP21-3Q3LHN1 58 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 AWAT1Q58HT5 328 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 C10orf55Q5SWW7 151 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 LYZL2Q7Z4W2 148 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 STPG2Q8N412 459 aa16.6■□□□□ 0.25
CACNB3-210ENST00000548874 WIPF2Q8TF74 440 aaPredicted RBP16.6■□□□□ 0.25
CACNB3-210ENST00000548874 MITD1Q8WV92 249 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms