RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 KCNIP3Q9Y2W7 256 aa12.96□□□□□ -0.33
PACSIN3-210ENST00000533686 ARPC1BO15143 372 aaKnown RBP12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 ATP6V0E1O15342 81 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 KRASP01116 189 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 IGKV1-39P01597 117 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 IGKV1D-39P04432 117 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 MAS1LP35410 378 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 SSBP2P81877 361 aaPredicted RBP12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 DMBX1Q8NFW5 382 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 CITED1Q99966 193 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM222Q9H0R3 208 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 ZNF430Q9H8G1 570 aaPredicted RBP12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 PARP11Q9NR21 331 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM140Q9NV12 185 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 LINC00527Q9UJ94 153 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 TBC1D24Q9ULP9 559 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
PACSIN3-210ENST00000533686 ANK2Q01484 3957 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 PSMB11A5LHX3 300 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 UPK2O00526 184 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 ATG12O94817 140 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 CNIH1O95406 144 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 CDS2O95674 445 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 OR5AC1P0C628 307 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 AKR1C4P17516 323 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 VDAC1P21796 283 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SLC6A1P30531 599 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 UBE2MP61081 183 aaKnown RBP12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SLC35B1P78383 322 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 IFITM3Q01628 133 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM267Q0VDI3 215 aaPredicted RBP12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SP6Q3SY56 376 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM128Q5BJH2 165 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 MZT2BQ6NZ67 158 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SHISA2Q6UWI4 295 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 TMED4Q7Z7H5 227 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SLC25A42Q86VD7 318 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 CENPSQ8N2Z9 138 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SGMS2Q8NHU3 365 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 GLYATL2Q8WU03 294 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 ARPC1AQ92747 370 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 SEC22AQ96IW7 307 aa12.94□□□□□ -0.34
PACSIN3-210ENST00000533686 ACTL6BO94805 426 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 G6PCP35575 357 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 GNB1P62873 340 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 RPL8P62917 257 aaKnown RBP12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 SUPT4H1P63272 117 aaKnown RBP12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 CFHR3Q02985 330 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TNXAQ16473 311 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 AKIRIN2Q53H80 203 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 C19orf54Q5BKX5 351 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 COMMD1Q8N668 190 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 OR5AU1Q8NGC0 362 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 ABHD5Q8WTS1 349 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM68Q96MH6 324 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM56Q96MV1 263 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TSC22D3Q99576 134 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 FBXO7Q9Y3I1 522 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM56-RWDD3S4R434 201 aa12.93□□□□□ -0.34
PACSIN3-210ENST00000533686 TRAV41A0A0B4J266 112 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 ANXA3P12429 323 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 HLA-GP17693 338 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 PPIFP30405 207 aaKnown RBP12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 TMEM187Q14656 261 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 MINDY2Q8NBR6 621 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 SRSF12Q8WXF0 261 aaKnown RBP12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 IL22RA2Q969J5 263 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 WSB1Q9Y6I7 421 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 TENM1Q9UKZ4 2725 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 STAB1Q9NY15 2570 aa12.92□□□□□ -0.34
PACSIN3-210ENST00000533686 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 PIGBOS1A0A0B4J2F0 54 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 G3V318 75 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 FBXO24O75426 580 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 IGHG4P01861 327 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 TCRBP04435 133 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 P0C879 139 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 SRPXP78539 464 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 H2BFWTQ7Z2G1 175 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 ZNF329Q86UD4 541 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 SELENOHQ8IZQ5 122 aaKnown RBP12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 LFNGQ8NES3 379 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 OR4X2Q8NGF9 303 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 RBPMSQ93062 196 aaKnown RBP12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 FAM103A1Q9BTL3 118 aaKnown RBP12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 ALX4Q9H161 411 aaPredicted RBP12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 FLVCR2Q9UPI3 526 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 PLXNB1O43157 2135 aa12.91□□□□□ -0.34
PACSIN3-210ENST00000533686 FAM240BA0A1B0GVZ2 78 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 MSGN1A6NI15 193 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 SNAPC5O75971 98 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 SFT2D2O95562 160 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 IGKV1-5P01602 117 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 ELANEP08246 267 aa12.9□□□□□ -0.34
PACSIN3-210ENST00000533686 OR9G9P0C7N8 305 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms