RNA–Protein interactions for RNA: ENST00000533476.5

UBXN1-215, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 1,912 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-215ENST00000533476 C17orf112F2Z3M2 114 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 CLN5O75503 358 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 CXCL1P09341 107 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 ERVFRD-1P60508 538 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 TGIF2LYQ8IUE0 185 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 OR10G9Q8NGN4 311 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 OR10G7Q8NGN6 311 aa15.88■□□□□ 0.13
UBXN1-215ENST00000533476 NKX6-3A6NJ46 265 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 CCL8P80075 99 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 MRPS11P82912 194 aaKnown RBP15.87■□□□□ 0.13
UBXN1-215ENST00000533476 HNF4GQ14541 408 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 ACTR3CQ9C0K3 210 aaPredicted RBP15.87■□□□□ 0.13
UBXN1-215ENST00000533476 CTDSP1Q9GZU7 261 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 OR51M1Q9H341 326 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 SLC25A22Q9H936 323 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 DCAF16Q9NXF7 216 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 WDR83OSQ9Y284 106 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 IGF2RP11717 2491 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 HCFC1P51610 2035 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 PLCE1Q9P212 2302 aa15.87■□□□□ 0.13
UBXN1-215ENST00000533476 DYSFO75923 2080 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 TRGV8A0A0C4DH27 118 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 CLDN34H7C241 214 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 CDX1P47902 265 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-215ENST00000533476 ZNF674Q2M3X9 581 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 ZNF343Q6P1L6 599 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 GGACTQ9BVM4 153 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 SH3BGRL2Q9UJC5 107 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 MGAQ8IWI9 3026 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 TRAV3A0A0B4J244 114 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 C15orf61A6NNL5 157 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 IFNA10P01566 189 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 CD1BP29016 333 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 LYG1Q8N1E2 194 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 ZNF383Q8NA42 475 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 HEYLQ9NQ87 328 aaPredicted RBP15.86■□□□□ 0.13
UBXN1-215ENST00000533476 NIT2Q9NQR4 276 aa15.86■□□□□ 0.13
UBXN1-215ENST00000533476 RPUSD1Q9UJJ7 312 aaKnown RBP15.86■□□□□ 0.13
UBXN1-215ENST00000533476 DOCK11Q5JSL3 2073 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 hADV38S2A0JD32 116 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 K7ENP7 123 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 SOX15O60248 233 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 FABP1P07148 127 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 S100PP25815 95 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 TLE1Q04724 770 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 Q8N7P7 452 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 TCF19Q9Y242 345 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 FOXA2Q9Y261 457 aaPredicted RBP15.85■□□□□ 0.13
UBXN1-215ENST00000533476 LINC00312Q9Y6C7 94 aa15.85■□□□□ 0.13
UBXN1-215ENST00000533476 TMPRSS3P57727 454 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 MEF2BQ02080 365 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 POU2AF1Q16633 256 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 SLC25A48Q6ZT89 311 aaKnown RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 C1orf87Q8N0U7 546 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 SNRNP40Q96DI7 357 aaKnown RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 RHOVQ96L33 236 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 GSN-AS1Q9NRJ2 163 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 APC2O95996 2303 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 ACACAQ13085 2346 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 TGIF2-C20orf24A0A0A6YYL0 155 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 TRAV38-1A0A0B4J264 116 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 PRSS46E5RG02 174 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 ATXN7O15265 892 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 ZZEF1O43149 2961 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 MPDU1O75352 247 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 ACOT6Q3I5F7 207 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 WDR25Q64LD2 544 aaPredicted RBP15.84■□□□□ 0.13
UBXN1-215ENST00000533476 OR4A47Q6IF82 309 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 RAB24Q969Q5 203 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 MANBALQ9NQG1 85 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 TMEM14BQ9NUH8 114 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 DOK5Q9P104 306 aa15.84■□□□□ 0.13
UBXN1-215ENST00000533476 TRBV24-1A0A075B6N3 115 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 TMEM250H0YL14 139 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 RRHO14718 337 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 TMPRSS2O15393 492 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 MMP23AO75900 390 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 OPN1MWP04001 364 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 OPN1MW2P0DN77 364 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 OPN1MW3P0DN78 364 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 PSMB3P49720 205 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 GNG10P50151 68 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 CD81P60033 236 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 PRR30Q53SZ7 412 aaPredicted RBP15.83■□□□□ 0.12
UBXN1-215ENST00000533476 OR10A7Q8NGE5 316 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 NAT8Q9UHE5 227 aa15.83■□□□□ 0.12
UBXN1-215ENST00000533476 RP1L1Q8IWN7 2480 aaPredicted RBP15.83■□□□□ 0.12
UBXN1-215ENST00000533476 CYB5BO43169 146 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 NDUFB7P17568 137 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 MEF2CQ06413 473 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-215ENST00000533476 NCMAPQ5T1S8 102 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 ZCCHC14Q8WYQ9 949 aaKnown RBP15.82■□□□□ 0.12
UBXN1-215ENST00000533476 FAM210BQ96KR6 192 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 SLC25A10Q9UBX3 287 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-215ENST00000533476 URGCP-MRPS24S4R325 110 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 ELOA3CA0A087WX78 387 aaPredicted RBP15.82■□□□□ 0.12
UBXN1-215ENST00000533476 SEC14L6B5MCN3 397 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 HMGB3O15347 200 aaKnown RBP15.82■□□□□ 0.12
UBXN1-215ENST00000533476 HRASP01112 189 aa15.82■□□□□ 0.12
UBXN1-215ENST00000533476 CYP2G1PQ6ZSU1 146 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms